BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11148 (UTR included)
(1846 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A1G11 1425 0.0
BF01009A2C06 771 0.0
>BF01054A1G11
Length = 766
Score = 1425 bits (719), Expect = 0.0
Identities = 756/767 (98%), Gaps = 1/767 (0%)
Strand = Plus / Plus
Query: 412 tcttgcatcagacagtttcaaatctcaataacagttttgtcattactttcttaataattg 471
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tcttgcatcagacagtttcaaatctcaataacagttttgtcattactttcctaataattg 60
Query: 472 tttataattttatttattcttaattcgaaatgactcttctagttaaaacggaaaggaaaa 531
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 tttataattttatttattcttaat-cgaaatgactcttctagttaaaacggaaaggaaaa 119
Query: 532 tcgactcggaaccttgcttagccacatggagcgaaaaattaattgttggtactgataacg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tcgactcggaaccttgcttagccacatggagcgaaaaattaattgttggtactgataacg 179
Query: 592 gttttattaatacctatgatgaacatctgaatcccagttcttcatggatggctcacgggg 651
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 180 gttttattaatacctatgatgaacatctgaagcccagtttttcatggatggctcacgggg 239
Query: 652 ttcagttatttgcattagcagctagtgaaggaaaagtttattcagcttccaacgatggcg 711
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 240 ttcagttatttgcattagcagctagtgaaggcaaagtttattcagcttccaacgatggcg 299
Query: 712 gagtaagggtatggacatcagcaggtgacaaaatttcggaattgccacctcctgacggtg 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gagtaagggtatggacatcagcaggtgacaaaatttcggaattgccacctcctgacggtg 359
Query: 772 atataggatccctgtgtgtgttcggtaaattattatatgctggcgatgaattagggaatg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atataggatccctgtgtgtgttcggtaaattattatatgctggcgatgaattagggaatg 419
Query: 832 tgtatgttttcgaggacactaacttaaaagctaaatacaatgttctggaggaagtaaaag 891
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 420 tgtatgtttttgaggacactaacttaaaagctaaatataatgttctggaggaagtaaaag 479
Query: 892 atctcgaaataagtccaccttttatgtttacggctcgtgatctctatgtgacggttactg 951
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 480 atctcgaaataagtccaccttttatgtttacggcccgtgatctctatgtgacggttactg 539
Query: 952 aaattaaacctgatgtatcaaaagaccgatttgtcacccaacatgttatggagggacgtg 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaattaaacctgatgtatcaaaagaccgatttgtcacccaacatgttatggagggacgtg 599
Query: 1012 ctcccttgaggataagcggatcgaaacttgttgtaacaggacgaggtggtaataacattc 1071
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctcccttgaggataagtggatcgaaacttgttgtaacaggacgaggtggtaataacattc 659
Query: 1072 aactccacgagttatctttagagaaaaagtttaacaagctacatgaggtcaaggtcagtg 1131
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 660 aactccacgagttatctttagagaaaaagtttaacaagctacatgagatcaaggtcagtg 719
Query: 1132 acatgatattaacgagtttggcagtagttggaaatatggtgtggact 1178
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 720 acatgatattaacgagtttggcagtagttggaaatatagtgtggact 766
>BF01009A2C06
Length = 686
Score = 771 bits (389), Expect = 0.0
Identities = 389/389 (100%)
Strand = Plus / Minus
Query: 1458 atcttttaagatcattttatttatttaaacaacgtcaacaaaataggaagaattctataa 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 atcttttaagatcattttatttatttaaacaacgtcaacaaaataggaagaattctataa 627
Query: 1518 tagtaatagtgtgtaatttattgtaatttacagatattatatatataaggagatgaataa 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tagtaatagtgtgtaatttattgtaatttacagatattatatatataaggagatgaataa 567
Query: 1578 ataaggaggtaaattacttgatttactaattcactgctactacattttatcactttttat 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ataaggaggtaaattacttgatttactaattcactgctactacattttatcactttttat 507
Query: 1638 acaaactatataattagataataatttcaacatcacacaattcatcttcagatggtagtt 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 acaaactatataattagataataatttcaacatcacacaattcatcttcagatggtagtt 447
Query: 1698 tcactgttttaggatttacatagttgggatcaattggaggcaggccggctttctctctac 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcactgttttaggatttacatagttgggatcaattggaggcaggccggctttctctctac 387
Query: 1758 gatgcaattctatataagcttctctttgtgcccagtctctcatatggacatctggtgcat 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gatgcaattctatataagcttctctttgtgcccagtctctcatatggacatctggtgcat 327
Query: 1818 atgcccaacaaaatccaccaaaaactaga 1846
|||||||||||||||||||||||||||||
Sbjct: 326 atgcccaacaaaatccaccaaaaactaga 298
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,198
Number of extensions: 5367
Number of successful extensions: 5367
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5366
Number of HSP's successfully gapped: 2
Length of query: 1846
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1829
Effective length of database: 8,119,229
Effective search space: 14850069841
Effective search space used: 14850069841
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)