BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11150 (UTR included)
(3184 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1401_C1 2339 0.0
>BF14_1401_C1
Length = 1219
Score = 2339 bits (1180), Expect = 0.0
Identities = 1207/1218 (99%)
Strand = Plus / Plus
Query: 1316 cttttttacatcatttaaatctgaagttccatgggcaagttgttctaacagatggaatac 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cttttttacatcatttaaatctgaagttccatgggcaagttgttctaacagatggaatac 61
Query: 1376 tgcacaatgctgggtccctaatcacaacataaccaaacctaatggctctcaaacgcccac 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgcacaatgctgggtccctaatcacaacataaccaaacctaatggctctcaaacgcccac 121
Query: 1436 cgaacaattttttgagagaaaggtcttgagcatgagtgatggtatagaatttcctggggg 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgaacaattttttgagagaaaggtcttgagcatgagtgatggtatagaatttcctggggg 181
Query: 1496 catgcggtgggagttggcagcttgtttaatttgtgcttgggttttagtttactttgcact 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catgcggtgggagttggcagcttgtttaatttgtgcttgggttttagtttactttgcact 241
Query: 1556 ttggaaaagtataaaatcctcggcaaaagttcgatatatcaccacgactttaccatttct 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttggaaaagtataaaatcctcggcaaaagttcgatatatcaccacgactttaccatttct 301
Query: 1616 acttatcattgtatttcttggccgatctttaacactcgatggtgctgataaaggcttaag 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 302 acttatcattgtatttcttggccgatctttaacactcgatggtgctgataaagccttaag 361
Query: 1676 gttcttctttaaaccagactgggaactattaaaacaatcacgaccatgggtaaatgccgc 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gttcttctttaaaccagactgggaactattaaaacaatcacgaccatgggtaaatgccgc 421
Query: 1736 ctcgcaaatcttcaattctattggaattgcgtttggttcgatgataatgtttgcttcata 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctcgcaaatcttcaattctattggaattgcgtttggttcgatgataatgtttgcttcata 481
Query: 1796 taatcgatttgacaataacttcctacacgatactttggctgtatctttagttaatgcagt 1855
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 482 taatcgatttgacaataacttcctacacgatactttggccgtatctttagttaatgcagt 541
Query: 1856 aactagtctcattgttggaatttttacatttgctacaatcggcaacattgcttttgagca 1915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aactagtctcattgttggaatttttacatttgctacaatcggcaacattgcttttgagca 601
Query: 1916 aaacacatcagtgaaagtggtcatcgctgatagtcctgggctattgtttgtagtatatcc 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaacacatcagtgaaagtggtcatcgctgatagtcctgggctattgtttgtagtatatcc 661
Query: 1976 tcaagctatagctaaaatgccagcatcacaactttgggcagttttatttttcttcatgtt 2035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tcaagctatagctaaaatgccagcatcacaactttgggcagttttatttttcttcatgtt 721
Query: 2036 cctctgcctcggtttaaacagtcagttcgccatagttgaagttgtggtgacttctattca 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 cctctgcctcggtttaaacagtcagttcgccatagttgaagttgtggtgacttctattca 781
Query: 2096 agatggatttcccgatatgatacggaaacggctagtgtatcatgaacttctagttctctg 2155
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 agacggatttcccgatatgatacggaaacggctagtgtatcatgaacttctagttctctg 841
Query: 2156 cgtttgtgctgtttctttagtgtttggattgccacatattatacatagtggcatttacat 2215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 cgtttgtgctgtttctttagtgtttggattgccacatattatacatagtggcatttacat 901
Query: 2216 attccaacttatggattactacgcagcttcactgagtataacgtatttagctttctttga 2275
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 902 attccaacttatggattactatgcagcttcgctgagtataacgtatttagctttctttga 961
Query: 2276 agttgtgggcatagcctggttctatggagtggatcgtctgtctcaaaacattaaacagat 2335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 agttgtgggcatagcctggttctatggagtggatcgtctgtctcaaaacattaaacagat 1021
Query: 2336 gacaggtcaggctccatcgctgtacttcagattttgttggttgatagctgccccggcgct 2395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gacaggtcaggctccatcgctgtacttcagattttgttggttgatagctgccccggcgct 1081
Query: 2396 attgctagcgctttgggtagctagcctggtcgactacacaccgccgagttaccgtcaata 2455
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1082 attgctagcgctttgggtagctagcctggtcgactacacaccgccgnnntaccgtcaata 1141
Query: 2456 tcagtatccggcttgggcacaagtattaggctggactatcgcctcactttctttattatg 2515
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 tcagtatccggctngnncacaagtattaggctggactatcgcctcactttctttattatg 1201
Query: 2516 cattccagtctatgcagt 2533
||||||||||||||||||
Sbjct: 1202 cattccagtctatgcagt 1219
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 335,735
Number of extensions: 6570
Number of successful extensions: 6570
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6568
Number of HSP's successfully gapped: 1
Length of query: 3184
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3166
Effective length of database: 8,109,745
Effective search space: 25675452670
Effective search space used: 25675452670
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)