BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11154 (UTR included)
(2902 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1F05 1023 0.0
BF01032B1B03 815 0.0
>BF01055B1F05
Length = 756
Score = 1023 bits (516), Expect = 0.0
Identities = 525/528 (99%)
Strand = Plus / Plus
Query: 464 gttactttgtaatttataagtctaaaaggctttgaaaatggcggaatggaagcatttaat 523
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 225 gttactttgtaatttataagtctaaagggctttgaaaatggcggaatggaagcatttaat 284
Query: 524 aacagaatggttcaatgaatatgctgttctaagagaaaatgagatcaaaagctttgctgc 583
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 285 aacagaatggttcaatgaatatgctgttttaagagaaaatgagatcaaaagctttgctgc 344
Query: 584 cgaacatgagcataaccatgaaattgcaacagcaattttcaatttactctacagtgaaga 643
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgaacatgagcataaccatgaaattgcaacagcaattttcaatttactctacagtgaaga 404
Query: 644 cgaaagtgagaaccaagtgaaaggtcaaagaaatgaagtagatcaacagatgcttgaaaa 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cgaaagtgagaaccaagtgaaaggtcaaagaaatgaagtagatcaacagatgcttgaaaa 464
Query: 704 tgtttgcatacaactattcagtttctacagatctaaagaggttgaattgcaaagatttac 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tgtttgcatacaactattcagtttctacagatctaaagaggttgaattgcaaagatttac 524
Query: 764 attacagtttgttcccactttaatttacacatacctcagtaatgttgcccaaggcaatag 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 attacagtttgttcccactttaatttacacatacctcagtaatgttgcccaaggcaatag 584
Query: 824 taaagcgtgccggtgtatagaaacattactcattggtctttataactttgaagtggttga 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 taaagcgtgccggtgtatagaaacattactcattggtctttataactttgaagtggttga 644
Query: 884 tgaaaatggtaaaccaaaagttgtgtcatttaggttgccttcattggcgcaggcctctat 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tgaaaatggtaaaccaaaagttgtgtcatttaggttgccttcattggcgcaggcctctat 704
Query: 944 atatcatgagccattatcccttggatctcagttcctaacagaaagtgc 991
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 atatcatgagccattatcccttggatctcagttcctaacagaaagtgc 752
Score = 430 bits (217), Expect = e-120
Identities = 224/225 (99%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 119 ttggtgctgatcaataaaattcaatatgaaatactgatcttatttttccaaatgactagc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggtgctgatcaataaaattcaatatgaaatactgatcttatttttccaaatgactagc 60
Query: 179 tttctacgatcaatgtatttacttgacccaaattaattttaaatatattttttatcgtca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttctacgatcaatgtatttacttgacccaaattaattttaaatatattttttatcgtca 120
Query: 239 taaaaatacagattgaaataaataaaaacaattgg-ttttgaaggcacagttaataagtt 297
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 taaaaatacagattgaaataaataaaaacaattggtttttgaaggcacagttaataagtt 180
Query: 298 taaatacttttttacaattaacaagtacagcaacataaatcgttg 342
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaatacttttttacaattaacaagtacagcaacataaatcgttg 225
>BF01032B1B03
Length = 667
Score = 815 bits (411), Expect = 0.0
Identities = 414/415 (99%)
Strand = Plus / Plus
Query: 1503 tcattccgtacgaaaaaattaccagatgacattccaatccaggccggtcaagccgtttcg 1562
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 12 tcattccgtacgaaaaaattaccagatgacattccaatccaggctggtcaagccgtttcg 71
Query: 1563 acggattcagccgaaatgctgacatccataacagaagaaggcgaagatactcccatgcaa 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 acggattcagccgaaatgctgacatccataacagaagaaggcgaagatactcccatgcaa 131
Query: 1623 cgcggcgctgtgaggagctccaaaccacgacacggcgggctgctcagcaagaagaaagat 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cgcggcgctgtgaggagctccaaaccacgacacggcgggctgctcagcaagaagaaagat 191
Query: 1683 atcaaagacaagacgaatgataagaaaacaccaacacagaaggggatctggaacagcctg 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atcaaagacaagacgaatgataagaaaacaccaacacagaaggggatctggaacagcctg 251
Query: 1743 agtggtggtggagacatggtcgacgcgaacgctgacggcttcgaagccaacggaagcgtt 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agtggtggtggagacatggtcgacgcgaacgctgacggcttcgaagccaacggaagcgtt 311
Query: 1803 aaggacgaaatttcgatgacgtcagtccagaacagttcagaaaattcggactcgcgatcc 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaggacgaaatttcgatgacgtcagtccagaacagttcagaaaattcggactcgcgatcc 371
Query: 1863 caggtgaccacggattctttggacatggagacgccgcggtttgccgcgatgcaag 1917
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 caggtgaccacggattctttggacatggagacgccgcggtttgccgcgatgcaag 426
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 373,683
Number of extensions: 8219
Number of successful extensions: 8219
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8218
Number of HSP's successfully gapped: 3
Length of query: 2902
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2884
Effective length of database: 8,109,745
Effective search space: 23388504580
Effective search space used: 23388504580
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)