BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11155 (UTR included)
(1795 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B1A02 630 e-180
>BF01014B1A02
Length = 822
Score = 630 bits (318), Expect = e-180
Identities = 321/322 (99%)
Strand = Plus / Minus
Query: 1168 agatatcacgaccaatgttggaagctcttgttgctagaaacgcattgaacactgtccgtc 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agatatcacgaccaatgttggaagctcttgttgctagaaacgcattgaacactgtccgtc 273
Query: 1228 ttaaagctttaaagaaacaacatcaggagcttatggctaaattagataagatgtcttgta 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttaaagctttaaagaaacaacatcaggagcttatggctaaattagataagatgtcttgta 213
Query: 1288 atgtttagattaagtacatgacatttcagttataaaataaaaaaccatacatagaagtca 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atgtttagattaagtacatgacatttcagttataaaataaaaaaccatacatagaagtca 153
Query: 1348 ataaaatcaagttatctttaaataaatctagtccactagaaataattacaaatcattttt 1407
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 152 ataaaatcaagttatctttaaataaatctagtccaccagaaataattacaaatcattttt 93
Query: 1408 atcaatcatttcaaagccatctgatgaatcaaaactagaaaccctcttcctcctattaat 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atcaatcatttcaaagccatctgatgaatcaaaactagaaaccctcttcctcctattaat 33
Query: 1468 atcttgagagctgtagactaaa 1489
||||||||||||||||||||||
Sbjct: 32 atcttgagagctgtagactaaa 11
Score = 295 bits (149), Expect = 1e-79
Identities = 149/149 (100%)
Strand = Plus / Minus
Query: 1021 agatcttgacacagttacctgctattctaaaggaagaagaggatgaatcttataaaaatg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 agatcttgacacagttacctgctattctaaaggaagaagaggatgaatcttataaaaatg 539
Query: 1081 aagcggagggaagtgattgtgaagatattctaaataaacaacataattcagctgtaagaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aagcggagggaagtgattgtgaagatattctaaataaacaacataattcagctgtaagaa 479
Query: 1141 ctatagctattggacatatagttgaaaag 1169
|||||||||||||||||||||||||||||
Sbjct: 478 ctatagctattggacatatagttgaaaag 450
Score = 220 bits (111), Expect = 6e-57
Identities = 111/111 (100%)
Strand = Plus / Minus
Query: 912 atacaaatcacatgcttccaatcagttaatgaaggtacaaatcaaagcagacgagaaatt 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 atacaaatcacatgcttccaatcagttaatgaaggtacaaatcaaagcagacgagaaatt 722
Query: 972 gaactggaaattactaacagcaatgactctctaacattaaataattttgag 1022
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaactggaaattactaacagcaatgactctctaacattaaataattttgag 671
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,974
Number of extensions: 5051
Number of successful extensions: 5051
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5051
Number of HSP's successfully gapped: 3
Length of query: 1795
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1778
Effective length of database: 8,119,229
Effective search space: 14435989162
Effective search space used: 14435989162
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)