BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11156 (UTR included)
(2224 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2888_C1 2222 0.0
>BF14_2888_C1
Length = 1164
Score = 2222 bits (1121), Expect = 0.0
Identities = 1142/1149 (99%)
Strand = Plus / Plus
Query: 644 tttaataacaaaactagaaaaggaattattttgcgatggaactgtttacaccggctctac 703
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 tttaataacaaaactagaaaaggaattattttgcgatggaactgtgtacaccggctctac 60
Query: 704 gggactagcattatattatttaatgttaggtctcgggaaccatgattctctacaagataa 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggactagcattatattatttaatgttaggtctcgggaaccatgattctctacaagataa 120
Query: 764 tctgcagaaagccctggactatttagatctggataaattaaaaggaaggaggataagttt 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgcagaaagccctggactatttagatctggataaattaaaaggaaggaggataagttt 180
Query: 824 tttgtgtggtgatgctggtccacttgcaattgcaactgttatttcacacaagttaggtac 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgtgtggtgatgctggtccacttgcaattgcaactgttatttcacacaagttaggtac 240
Query: 884 aagacgtccaaattatttgcctgattacagggaactatcagtaaggctgttaaaccttgg 943
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagacggccaaattatttgcctgattacagggaactatcagtaaggctgttaaaccttgg 300
Query: 944 atcacttttaaatgactcaccagatgaactgctgtatgggaaagcaggatatttgtattc 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcacttttaaatgactcaccagatgaactgctgtatgggaaagcaggatatttgtattc 360
Query: 1004 attgctgtttgttaataaatatgtccatggcagaaatgttatttccgatgatcatattga 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attgctgtttgttaataaatatgtccatggcagaaatgttatttccgatgatcatattga 420
Query: 1064 aaaggtggcttctttaatcttgaagtcgggtaaagagttttcgcagcatacaaaatcgga 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaggtggcttctttaatcttgaagtcgggtaaagagttttcgcagcatacaaaatcgga 480
Query: 1124 gagtccacttctgtggcaatggcatgacaaagtatatttaggagcagctcatggaatggc 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagtccacttctgtggcaatggcatgacaaagtatatttaggagcagctcatggaatggc 540
Query: 1184 tggaattttatatatattattgcaggctcgtgcttacataaagtcccatgacatcagagg 1243
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggaattttgtatatattattgcaggctcgtgcttacataaagtcccatgacatcagagg 600
Query: 1244 ttttgttaggcctaccatagattggttaatgaaacaacaatttcctagtgggaatttccc 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttttgttaggcctaccatagattggttaatgaaacaacaatttcctagtgggaatttccc 660
Query: 1304 ttcctcattacacagtagctccggtgatagattggtacagtggtgtcatggtgcaccagg 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcctcattacacagtagctccggtgatagattggtacagtggtgtcatggtgcaccagg 720
Query: 1364 ttttatacctttatgcatattggcttatcaggtctttgaagaagagagatatttaaaaat 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttttatacctttatgcatattggcttatcaggtctttgaagaagagagatatttaaaaat 780
Query: 1424 agctattcaatgtggagatttgatatggcagagaggattgtgtgctaaaggctatagttt 1483
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agctattcaatgtggagacttgatatggcagagaggattgtgtgctaaaggctatagttt 840
Query: 1484 atgtcatggtgttagtggcaatgcttatgcatttcttcagctgtatcaagtattaaagaa 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atgtcatggtgttagtggcaatgcttatgcatttcttcagctgtatcaagtattaaagaa 900
Query: 1544 acctgtctaccttcaccgcgctgggtgcttcatggagtggtgcgcggtggagagacaagg 1603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 acctgtctaccttcaccgcgctgggtgcttcatggagtggtgcgcggtggagagacaagg 960
Query: 1604 cactgagctacaccgacctgatcggccggcctcgctcttcgaagggttactcggcagaat 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cactgagctacaccgacctgatcggccggcctcgctcttcgaagggttactcggcagaat 1020
Query: 1664 atacttggtcgaagacattattaacccacagacggctttattccctggactatgcttata 1723
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atacttggtcgaagacgttattaacccacagacggctttattccctggactatgcttata 1080
Query: 1724 agttacttcaaataactatttaaatttatcagcagcacttcccaaaatgataactagcaa 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 agttacttcaaataactatttaaatttatcagcagcacttcccaaaatgataactagcaa 1140
Query: 1784 aattataaa 1792
|||| ||||
Sbjct: 1141 aattttaaa 1149
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 375,562
Number of extensions: 9349
Number of successful extensions: 9349
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9349
Number of HSP's successfully gapped: 1
Length of query: 2224
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2207
Effective length of database: 8,119,229
Effective search space: 17919138403
Effective search space used: 17919138403
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)