BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11160 (UTR included)
(1786 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1957_C1 1390 0.0
>BF14_1957_C1
Length = 1009
Score = 1390 bits (701), Expect = 0.0
Identities = 711/715 (99%)
Strand = Plus / Plus
Query: 933 tttctgggtattttgtgtatggcgttgggcacaccgtgggcatccgcttggtatgtcttt 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tttctgggtattttgtgtatggcgttgggcacaccgtgggcatccgcttggtatgtcttt 354
Query: 993 gtagcagtgacgtccttcatcaccaccctcatttggagttttgtctatttcctgagcatc 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtagcagtgacgtccttcatcaccaccctcatttggagttttgtctatttcctgagcatc 414
Query: 1053 agagaagccctgaaaatacccatcaattgggtactatctgaactaatcagcacctgtttg 1112
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 415 agagaagccctgaaaatacccatcaattgggtactatctgaattaatcagcacctgtttg 474
Query: 1113 gaaacgttcttctatcttattgccttcatagtgatgtttacttcagtttatggcaatttc 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaaacgttcttctatcttattgccttcatagtgatgtttacttcagtttatggcaatttc 534
Query: 1173 ggacgaaacatcgcagccgctgtgttcggtatattcaacacgctcgcatacggcgccagt 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggacgaaacatcgcagccgctgtgttcggtatattcaacacgctcgcatacggcgccagt 594
Query: 1233 tcgtacctcctgtaccaggaacacagaagcagcgcgccggcgggaacggcgtgagtatgg 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tcgtacctcctgtaccaggaacacagaagcagcgcgccggcgggaacggcgtgagtatgg 654
Query: 1293 cgccggagcacctctcgaacaatatttgttgtttttaatattatttcatagataaacttt 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cgccggagcacctctcgaacaatatttgttgtttttaatattatttcatagataaacttt 714
Query: 1353 atattcattttgtacagtctaataatgataaaattatattcgaatttttattattgaatc 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atattcattttgtacagtctaataatgataaaattatattcgaatttttattattgaatc 774
Query: 1413 gacaaaattattataatataatatataaagtgtaaggcatttcatatttaacagaattta 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 775 gacaaaattattataatataatatataaagtgtaaggcatttcatatttaacagaatgta 834
Query: 1473 atattaacggccatattggattttcggagtgggtggtacctgttcacgtgggattatttt 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 atattaacggccatattggattttcggagtgggtggtacctgttcacgtgggattatttt 894
Query: 1533 ctgacttatttattttttattttgtgaccgtttacagtgtgactgagatttatattcatt 1592
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 895 ctgacttatttattttttattttgtgaccgtttacagtgtgactgnnatttatattcatt 954
Query: 1593 gcgttatatgggttatgtttgtgggctgatatttttgatgtttatatatcatttc 1647
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 gcgttatatgggttatgtttgtgggctgatatttttgatgtttatatatcatttc 1009
Score = 581 bits (293), Expect = e-165
Identities = 293/293 (100%)
Strand = Plus / Plus
Query: 358 cacgaaacataccacgttaaacgctgggggagaaaatgttttgcgcgtcctagtgtattg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cacgaaacataccacgttaaacgctgggggagaaaatgttttgcgcgtcctagtgtattg 61
Query: 418 agatttataaattatagtgtcagtgctagtgttactactattagagtattctttttcaac 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agatttataaattatagtgtcagtgctagtgttactactattagagtattctttttcaac 121
Query: 478 caaagtaaacagcttagaggatgatggctcccgagacggtggttacagtagatcataaca 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caaagtaaacagcttagaggatgatggctcccgagacggtggttacagtagatcataaca 181
Query: 538 aaccagcacagcagcaggcgccgccgcagcagcaaggacgtgcgctggattggattaaaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaccagcacagcagcaggcgccgccgcagcagcaaggacgtgcgctggattggattaaaa 241
Query: 598 tcaatgtagaatatttcaaaacgccgcccggtttactgaagatcatcgaattg 650
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcaatgtagaatatttcaaaacgccgcccggtttactgaagatcatcgaattg 294
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,633
Number of extensions: 4535
Number of successful extensions: 4535
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4533
Number of HSP's successfully gapped: 2
Length of query: 1786
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1769
Effective length of database: 8,119,229
Effective search space: 14362916101
Effective search space used: 14362916101
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)