BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11169 (UTR included)
(2515 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A2A04 1407 0.0
BF01012A2D02 256 2e-67
>BF01034A2A04
Length = 789
Score = 1407 bits (710), Expect = 0.0
Identities = 774/792 (97%), Gaps = 5/792 (0%)
Strand = Plus / Plus
Query: 1365 gaagcgtcttcagtgggcgagagcgactcgccagggtctgatccggtcgtcaacacatct 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagcgtcttcagtgggcgagagcgactcgccagggtctgatccggtcgtcaacacatct 60
Query: 1425 ctgccggccggaaaggtggtgcgtcgtcgtgcgggcgcgtcatcccgctacccgtcccgc 1484
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 ctgccggccggaaaggtggtgcgtcgtcgtgcgggcgcgtcctcccgctacccgtcccgc 120
Query: 1485 tcgtcccaccccggccggcctctgtccgcacacgagcctctcgcacacgcacacacacac 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgtcccaccccggccggcctctgtccgcacacgagcctctcgcacacgcacacacacac 180
Query: 1545 ggacgagcgctcacagacactccagcatcatccaccgagaggattcaggacggaagtctg 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 ggacgagcgctcacagacactccagcatcatccaccgagaggattcaggacggaaacgag 240
Query: 1605 ctcagtcgcctgtgttcgcgctcccagtcgagcgccccggtgtccgtccccgagtggttg 1664
|||| | | || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 -tcagcggacagt--tcgcgctcccagtcgagcgccccggtgtccgtccccgagtggttg 297
Query: 1665 accgtcggtgagagcgtacagatccgcctcagtagtagcacgggtgtggtcgcatacgtg 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 accgtcggtgagagcgtacagatccgcctcagtagtagcacgggtgtggtcgcatacgtg 357
Query: 1725 ggcgccactcatttcgcgccaggactgtgggtgggcgtcgacctggacgctcccacggga 1784
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggcgccactcatttcgctccaggactgtgggtgggcgtcgacctggacgctcccacggga 417
Query: 1785 aagaacgacggctcggtcggcggcacgcggtacttcacgtgtcgcccgcgtcacggagtg 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aagaacgacggctcggtcggcggcacgcggtacttcacgtgtcgcccgcgtcacggagtg 477
Query: 1845 ttcgtgcgtgcggacaagttggtccacgaccggcgagggaagagcgcccgggccttcagg 1904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttcgtgcgtgcggacaagttggtccacgaccggcgagggaagagcgcccgggccttcagg 537
Query: 1905 gacgccgagctcaagcgggcctccagcaagggtgagggtctgcacaaccttcacaggacg 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gacgccgagctcaagcgggcctccagcaagggtgagggtctgcacaaccttcacaggacg 597
Query: 1965 aggagtcgcggcgacagtatgaacactgttggcaagacacgcgccaaatagacacacaca 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aggagtcgcggcgacagtatgaacactgttggcaagacacgcgccaaatagacacacaca 657
Query: 2025 catacacacaacc--cacacacatacacaccggacacatgtactatgacgtcctctgtgt 2082
||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 658 catacacacaacccacacacacatacacaccggacacatgtaccatgacgtcctctgtgt 717
Query: 2083 atagtaatagtttgtatcgtcgacctgacattagcagttccattacacgcatgaatacga 2142
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 718 atagtaatagtttgtatcgtcgacctgacattggcagttccattacacgcatgaacacga 777
Query: 2143 agctaactacgc 2154
||||||||||||
Sbjct: 778 agctaactacgc 789
>BF01012A2D02
Length = 805
Score = 256 bits (129), Expect = 2e-67
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 2387 tgtaaataatttaagcgattattattattattatttcccgttgtacatatgttgatctcc 2446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 tgtaaataatttaagcgattattattattattatttcccgttgtacatatgttgatctcc 84
Query: 2447 gtgtgtcgcttgtcgatatttttattatttagtatcggatgtatggtttgtggtccgcgc 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gtgtgtcgcttgtcgatatttttattatttagtatcggatgtatggtttgtggtccgcgc 144
Query: 2507 cgtacagcg 2515
|||||||||
Sbjct: 145 cgtacagcg 153
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 204,496
Number of extensions: 4666
Number of successful extensions: 4666
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4659
Number of HSP's successfully gapped: 3
Length of query: 2515
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2498
Effective length of database: 8,119,229
Effective search space: 20281834042
Effective search space used: 20281834042
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)