BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11179 (UTR included)
(1531 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_807_C1 652 0.0
BF01055B2F03 121 3e-27
BF14_736_C1 113 8e-25
BF01059A2H01 78 5e-14
>BF14_807_C1
Length = 1411
Score = 652 bits (329), Expect = 0.0
Identities = 335/337 (99%)
Strand = Plus / Plus
Query: 436 aggagcgtctgttcagccagcacatcagcgtcgtgtctaacaagaggcgcgacaagctcc 495
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 815 aggagcgtctattcagccagcacatcagcgtcgtgtccaacaagaggcgcgacaagctcc 874
Query: 496 gggccatgctggctgagctgggtgtagactccacggcgcagtggaaggacgttaagaccc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gggccatgctggctgagctgggtgtagactccacggcgcagtggaaggacgttaagaccc 934
Query: 556 agctccaggagaatccagccgcaccgacatacaagagcgccgcccagatggagcgagagt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 agctccaggagaatccagccgcaccgacatacaagagcgccgcccagatggagcgagagt 994
Query: 616 tccgtgactaccagagggacaaacagagcaatgccaagacggctctgagacagctgctcc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 tccgtgactaccagagggacaaacagagcaatgccaagacggctctgagacagctgctcc 1054
Query: 676 tggagaccagggcgatcacacacaggaccctggccgcggtcagggacggcccgcaggcgc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 tggagaccagggcgatcacacacaggaccctggccgcggtcagggacggcccgcaggcgc 1114
Query: 736 tcaccgccctgcacgacaccatcaaacacgacgccag 772
|||||||||||||||||||||||||||||||||||||
Sbjct: 1115 tcaccgccctgcacgacaccatcaaacacgacgccag 1151
Score = 264 bits (133), Expect = 4e-70
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 902 atacacggccctggagcacatcccggacgagcgccaggcgatcatcatgggctacctcga 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 atacacggccctggagcacatcccggacgagcgccaggcgatcatcatgggctacctcga 1211
Query: 962 ggagctggacaagaaggggcctccgccgccgcccacggccaccgagcccagcaggaggac 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 ggagctggacaagaaggggcctccgccgccgcccacggccaccgagcccagcaggaggac 1271
Query: 1022 caagcagtgacag 1034
|||||||||||||
Sbjct: 1272 caagcagtgacag 1284
Score = 167 bits (84), Expect = 7e-41
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 1278 cagacggacggcggctgtgcgatcgcggtgaccgggaagtggcgggtggtgtgaatagtt 1337
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1282 cagacggacggcggctgtgcgatcgcggtgactgggaagtggcgggtggtgtgaatagtt 1341
Query: 1338 tgattgtaatttttattaaataaacaaa 1365
||||||||||||||||||||||||||||
Sbjct: 1342 tgattgtaatttttattaaataaacaaa 1369
>BF01055B2F03
Length = 776
Score = 121 bits (61), Expect = 3e-27
Identities = 114/129 (88%), Gaps = 7/129 (5%)
Strand = Plus / Plus
Query: 94 ccatcccatagctcgtgtggtatcaggaatctcctggttcacg--gctcggtgtt----c 147
|||| ||||||| ||||||| |||||| |||||||||||||| || ||||||| |
Sbjct: 597 ccattccatagcgtgtgtggtgtcaggagtctcctggttcacgcggcgcggtgttggttc 656
Query: 148 cgcggagtcagcggcgtcactcgttatatgatattctatacatacaacgatgttgccccg 207
||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||
Sbjct: 657 cgcggagtcagcggcgtcactcgttatatgatattctatccatacagcgatgtt-ccccg 715
Query: 208 gcgatgttc 216
|||||||||
Sbjct: 716 gcgatgttc 724
>BF14_736_C1
Length = 796
Score = 113 bits (57), Expect = 8e-25
Identities = 91/101 (90%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 802 ttactacagctcgaaaacgggc-ggctcggccggggaagtaccgccctctcacggaagat 860
||||||||||||||| | |||| |||||| ||||||||||||| ||||||||| ||||||
Sbjct: 609 ttactacagctcgaacatgggctggctcgaccggggaagtaccaccctctcacagaagat 668
Query: 861 cggcggggagtagtctttaatggctgcgtttcgtcccatga 901
||||| | ||||||||||| |||||||||||||||| ||||
Sbjct: 669 cggcgtgaagtagtctttagtggctgcgtttcgtccaatga 709
>BF01059A2H01
Length = 865
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 835 ggaagtaccgccctctcacggaagatcggcggggagtagtctttaatggctgcgtttcgt 894
||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||| |
Sbjct: 291 ggaagtaccaccctctcacagaagatcggcatggagtagtctttaatggctgcgattctt 232
Query: 895 cccatga 901
|| ||||
Sbjct: 231 ccgatga 225
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,853
Number of extensions: 8912
Number of successful extensions: 8912
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 8910
Number of HSP's successfully gapped: 6
Length of query: 1531
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1514
Effective length of database: 8,119,229
Effective search space: 12292512706
Effective search space used: 12292512706
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)