BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11204 (UTR included)
(5971 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2B02 1596 0.0
BF14_2361_C1 1296 0.0
>BF01010A2B02
Length = 855
Score = 1596 bits (805), Expect = 0.0
Identities = 844/858 (98%), Gaps = 3/858 (0%)
Strand = Plus / Plus
Query: 3053 agcgcaaacgtacttagagaataatgtccggaatctgacctcgccagccactttagcagc 3112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcgcaaacgtacttagagaataatgtccggaatctgacctcgccagccactttagcagc 60
Query: 3113 cactgttttagcgcttgttttggcaagaagtcctatcgtacctgaagcgttacttatact 3172
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 61 cactgttttagcgcttgttttggcaag---tcctatcgtgcctgaagcgttacttatact 117
Query: 3173 acgtaatgcatcaactactgaagaaggagagttcggttggccagctcccagaaaggatgc 3232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 acgtaatgcatcaactactgaagaaggagagttcggttggccagctcccagaaaggatgc 177
Query: 3233 agcagattggctccttgaagaaacctctagaaacatcaaaaccacttcctacgaagcggt 3292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 agcagattggctccttgaagaaacctctagaaacatcaaaaccacttcctacgaagcggt 237
Query: 3293 tacaatggagcagtatgtggctggcgtgcgtgtgttactagctgcgtgtgcgcggggagc 3352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tacaatggagcagtatgtggctggcgtgcgtgtgttactagctgcgtgtgcgcggggagc 297
Query: 3353 cttggcggaaggagaagcggcggctcggttcttatactatcgggcatcaactttacaaag 3412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cttggcggaaggagaagcggcggctcggttcttatactatcgggcatcaactttacaaag 357
Query: 3413 gcatcccagtctagcataccaagctacaaaagcagctgcgcagtacgctgcactggctca 3472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gcatcccagtctagcataccaagctacaaaagcagctgcgcagtacgctgcactggctca 417
Query: 3473 tgatagacatagagcactgacagtatctctggctacagctggaatggaattaacagacac 3532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tgatagacatagagcactgacagtatctctggctacagctggaatggaattaacagacac 477
Query: 3533 gttagaactacgcgcgttgacaccacctcggccactacaacttccaggtctacctactaa 3592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 478 gttagaactacgcgcgttgacaccacctcggccactacaacttccaggtctacctaccaa 537
Query: 3593 ggtgttcgtatacgccaccggcgctggatgtgccactgtacagggcacaatatcatattc 3652
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ggtgttcgtatacgccactggcgctggatgtgccactgtacagggcacaatatcatattc 597
Query: 3653 gacgtataatcctaaagcagaaaatgcgctgctgaacatccaagcagctattattgaaga 3712
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 598 gacgtataatcctaaagcagaaaatgcgctgctgaacatccaagcagctatcattgaaga 657
Query: 3713 gataagacctgaacgaagcagcatcgaagatttgcaaggaaacttgccgacattgatcat 3772
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 658 gataagacctgaacgaagcagcatcgaggatttgcaaggaaacttgccgacattgatcat 717
Query: 3773 taaatcttgcttcaaatggaaaggaaaagagcgctccggaattcttcgtttagaatcttc 3832
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 718 taaatcttgcttcaaatggaanngaaaagagcgctccggaattcttcgtttnnnatcttc 777
Query: 3833 tcttttctctggctatgaattacattcagtaaatcctgttgttcttgatggggccacgtt 3892
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tcttttctctggctatgagttacattcagtaaatcctgttgttcttgatggggccacgtt 837
Query: 3893 tgctgacttacattacgg 3910
||||||||||||||||||
Sbjct: 838 tgctgacttacattacgg 855
>BF14_2361_C1
Length = 1458
Score = 1296 bits (654), Expect = 0.0
Identities = 681/690 (98%)
Strand = Plus / Plus
Query: 5282 cactaaatcaaacaatatccctacgaaatcagatatcgcacctgaaaatagagaagggta 5341
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 4 cactaaatcaaacaatatccctacaaaatcagatatcgcacatgaaaatagagaagggta 63
Query: 5342 cgaaattttagacaaaaataatctttgggagcttcttaaagaaggtccggatgatactaa 5401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cgaaattttagacaaaaataatctttgggagcttcttaaagaaggtccggatgatactaa 123
Query: 5402 aatagaagataaaattaatgttcacaatcgattgaatgaagtgtcatctgtcaataatcg 5461
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 124 aatagaagataaaattaatgttcacaatcgattgaacgaagtgtcatctgtcaataatcg 183
Query: 5462 ttctttataagcagtgttgttatgtaatgtttaaggcacaaagacttttcgcatattttt 5521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttctttataagcagtgttgttatgtaatgtttaaggcacaaagacttttcgcatattttt 243
Query: 5522 atattcacgcccataacaaaactattaaaattttactgaataaacttcaagtcaaattcc 5581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atattcacgcccataacaaaactattaaaattttactgaataaacttcaagtcaaattcc 303
Query: 5582 tagcacattcgttgttgattgttaggttaatacgcactaattgtttataattttttaggt 5641
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tagcacactcgttgttgattgttaggttaatacgcactaattgtttataattttttaggt 363
Query: 5642 atatatgtattgtaaataagggatatactgtaatgaatatgagatttgcgctgtgactgt 5701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atatatgtattgtaaataagggatatactgtaatgaatatgagatttgcgctgtgactgt 423
Query: 5702 atagatgtatgcctgtctgaaatcaaaacttgagtctggacaaaagcatgatcttctaaa 5761
|||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||
Sbjct: 424 atagatgtatgcctgtctgaaatcaaaagctgagtctggaaataagcataatcttctaaa 483
Query: 5762 tgccaaaaataagcttcttaacacaatttatttaaatcataattctaaatcccaaaaatc 5821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgccaaaaataagcttcttaacacaatttatttaaatcataattctaaatcccaaaaatc 543
Query: 5822 ttaatgtccgtacatctaaatctaaataaactaaaggattagacgtaagtagaattacta 5881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ttaatgtccgtacatctaaatctaaataaactaaaggattagacgtaagtagaattacta 603
Query: 5882 atcagttaatttgtactcttaattgtatgtaatctaagtacttagattaatatcaacagt 5941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 atcagttaatttgtactcttaattgtatgtaatctaagtacttagattaatatcaacagt 663
Query: 5942 attttgtaataatatttactgtttaagtca 5971
||||||||||||||||||||||||||||||
Sbjct: 664 attttgtaataatatttactgtttaagtca 693
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 598,562
Number of extensions: 10362
Number of successful extensions: 10362
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10361
Number of HSP's successfully gapped: 2
Length of query: 5971
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5953
Effective length of database: 8,109,745
Effective search space: 48277311985
Effective search space used: 48277311985
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)