BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11205 (UTR included)
(3115 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2D02 1534 0.0
>BF01041A2D02
Length = 835
Score = 1534 bits (774), Expect = 0.0
Identities = 821/837 (98%), Gaps = 2/837 (0%)
Strand = Plus / Plus
Query: 1646 gtctgggaagataaggccatttatagacgttaacaataagagctatctatcaaagctggt 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctgggaagataaggccatttatagacgttaacaataagagctatctatcaaagctggt 60
Query: 1706 gttgaaactgtcgagaggacattcccaaacatctaaagtattgaagaaccttaaatcaag 1765
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgaaattgtcgagaggacattcccaaacatctaaagtattgaagaaccttaaatcaag 120
Query: 1766 tccgcctcaagctctgtcactcgtcggacaagttggtatagagaagactatgtgggagta 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 tccgcctcaagctctgtcactcgtcggacaagttggtatagagaagactatgtgggaata 180
Query: 1826 tacaagaataatgtcacttttagaacattcgttctttatagctggcatctggcactcaga 1885
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 tacaagaataatgtcacttctagaacattcgttctttatagctggcatctggcacacaga 240
Query: 1886 caccagatcaaatgaatcgattgaacaaataaatcaaacgatccaagacatgacaatggg 1945
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 241 caccagatcaaatgaatcgattgaacaaatcaatcaaaccatccaagacatgacaatggg 300
Query: 1946 tgatacgttgaatccgtttgagaatctcacatcaacggaacactccatacgtctggacac 2005
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacacgttgaatccatttgagaatctcacatcaacggaacactccatacgtctggacac 360
Query: 2006 cgagtctgtgtgcattgatgatgacaacgagctcactgttgatgactttacatcgctgaa 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgagtctgtgtgcattgatgatgacaacgagctcactgttgatgactttacatcgctgaa 420
Query: 2066 gaagcatggcttggttaatgagaggaaagacatcaatgaggtgccgttaatagccgatga 2125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaagcatggcttggttaatgagaggaaagacatcaatgaggtgccgttaatagccgatga 480
Query: 2126 gatagatataagcccgtggaagaatctattgatgaagtttgctcaagtgcatgtctgttt 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatagatataagcccgtggaagaatctattgatgaagtttgctcaagtgcatgtctgttt 540
Query: 2186 ggaacatttgtacagagcggagacatgtctgagggcagattttgtccaactgaaaccgat 2245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggaacatttgtacagagcggagacatgtctgagggcagattttgtccaactgaaaccgat 600
Query: 2246 ggcatcaaagttattagagagctatgtatctgagaagtcgtccattaaaaccgtcggcca 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggcatcaaagttattagagagctatgtatctgagaagtcgtccattaaaaccgtcggcca 660
Query: 2306 gcttatgaatgaacccatacataatatattaataccaataacaaataacatagtacagga 2365
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gctgatgaatgaacccatacataatatattaataccaataacaaataacatagtacagga 720
Query: 2366 tcaactcaagaaaccagctgcttggtacagattggaacttggattcaaagaagtctctga 2425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcaactcaagaaaccagctgcttggtacagattggaacttggattcaaagaagtctctga 780
Query: 2426 tgttagaaactacaaattagtcagcgttttttcacaactacctgcattcccaccaca 2482
||| || | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgtgagnnnnt--aaattagtcagcgttttttcacaactacctgcattcccaccaca 835
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 431,752
Number of extensions: 12067
Number of successful extensions: 12067
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12066
Number of HSP's successfully gapped: 1
Length of query: 3115
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3097
Effective length of database: 8,109,745
Effective search space: 25115880265
Effective search space used: 25115880265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)