BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11209 (UTR included)
(1849 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1667_C1 1937 0.0
>BF14_1667_C1
Length = 1046
Score = 1937 bits (977), Expect = 0.0
Identities = 1030/1047 (98%), Gaps = 3/1047 (0%)
Strand = Plus / Plus
Query: 550 cccgcgcatgcgccggcgtggcgcgagcgaacagcgttgaggcattagacctaacgccga 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cccgcgcatgcgccggcgtggcgcgagcgaacagcgttgaggcattagacctaacgccga 61
Query: 610 atgtcgtcattactcaagagaaggttcaaacgccgacagaaataccagtaaacgaacgtt 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atgtcgtcattactcaagagaaggttcaaacgccgacagaaataccagtaaacgaacgtt 121
Query: 670 ttccatctgcggtgctcttcggccgcacgtgtggtggtaccataatcagccccacatgga 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttccatctgcggtgctcttcggccgcacgtgtggtggtaccataatcagccccacatgga 181
Query: 730 tcctaacagccgcccattgtaccttgttcacgggcgggcgcgacatcctcgcgggtacta 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcctaacagccgcccattgtaccttgttcacgggcgggcgcgacatcctcgcgggtacta 241
Query: 790 acaactccgagaacgatacgggcgtgcgacgccgcgtgaagcgactagtcatacacccga 849
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 242 acaactccgagaacgatacgggcgtgcgacgccg--tgaagcgactagtcatacacccga 299
Query: 850 aattcgcagtcggcccatactggctcgacgcggacagatacgacatcaaacaggtgggag 909
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aattcgcagtaggcccatactggctcgacgcggacagatacgacatcaaacaggtgggag 359
Query: 910 ctcgctgggacttcttattggcagagttggagagcccgttgccgctggacgggaagacca 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctcgctgggacttcttattggcagagttggagagcccgttgccgctggacgggaagacca 419
Query: 970 tggcggtagcgaaactacaagaagacgccaggctgatccctggacaagaggtcggctacg 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tggcggtagcgaaactacaagaagacgccaggctgatccctggacaagaggtcggctacg 479
Query: 1030 ctggatacggcgctgaaaatcacggggagacaatgcgccatgaaatgcacggcatggatc 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctggatacggcgctgaaaatcacggggagacaatgcgccatgaaatgcacggcatggatc 539
Query: 1090 tcgaggtccagtctgaccaggagtgcggcaagctggtggagtacgaacctcaggacatgc 1149
|||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 540 tcgaagtccagtctgacgaggagtgcggcaagctggtggagtacgaccctcaggacatgc 599
Query: 1150 tctgtgcacgaggacggccgccgcggtacgactccgcgtgtaacggagacagtggaagcg 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tctgtgcacgaggacggccgccgcggtacgactccgcgtgtaacggagacagtggaagcg 659
Query: 1210 gtctcataagaaacggcactataatcggcatagcgtcctgggtggaggacgacgccacgg 1269
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gtctcataaggaacggcactataatcggcatagcgtcctgggtggaggacgacgccacgg 719
Query: 1270 tctgtaggaacggtgctaaagtgtacttctcccgggtgtctagcgccagggactggatca 1329
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 720 tctgtaggaacggtgctaaagtgtacttctcccgggtgtccagcgccagggactggatca 779
Query: 1330 gacaagtcaccaagatataatagattagactagatacgtggtaatttaaaaccaaagata 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gacaagtcaccaagatataatagattagactagatacgtggtaatttaaaaccaaagata 839
Query: 1390 aaaaatatacaacgttaaacttaaaaaaatatatatgtatacagtatatatatagaggca 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 aaaaatatacaacgttaaacttaaaaaaatatatatgtatacagtatatatatagaggca 899
Query: 1450 cataatgata-tttttttaactaacaacggagatcaaataatttggttgttgaatatagg 1508
||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 900 tataatgatattttttttaactaacaacggagatcaaataatttggtngnnnaatatagg 959
Query: 1509 caatgaatagatggtaaatttcttttgtacattttatatatcatgtaaactacattaatt 1568
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 960 caatgaatagatggtaaatttcttttgtncattttatatatcatgtaaactacattaatt 1019
Query: 1569 aactcctcattaaataaatattcaatg 1595
| ||||||||||||||||||||||||
Sbjct: 1020 gattcctcattaaataaatattcaatg 1046
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,233
Number of extensions: 7234
Number of successful extensions: 7234
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7232
Number of HSP's successfully gapped: 1
Length of query: 1849
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1832
Effective length of database: 8,119,229
Effective search space: 14874427528
Effective search space used: 14874427528
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)