BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11213 (UTR included)
(2848 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_166_C1 1719 0.0
>BF14_166_C1
Length = 1352
Score = 1719 bits (867), Expect = 0.0
Identities = 870/871 (99%)
Strand = Plus / Plus
Query: 474 aggtttttcttcacggtcgccgccatcatggcgtcggacgaacagttctcgctatgttgg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aggtttttcttcacggtcgccgccatcatggcgtcggacgaacagttctcgctatgttgg 193
Query: 534 aacaatttccatgcgaatatgtcagcaggctttcatggcctgctgtcgcgtggagattta 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aacaatttccatgcgaatatgtcagcaggctttcatggcctgctgtcgcgtggagattta 253
Query: 594 gtagatgtaacattggctgccgaaggtagattactacaggcacacaaattagttttatca 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gtagatgtaacattggctgccgaaggtagattactacaggcacacaaattagttttatca 313
Query: 654 gtatgttctccctattttcaagaaatgttcaaaatgaaccccactcaacatcccatagta 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gtatgttctccctattttcaagaaatgttcaaaatgaaccccactcaacatcccatagta 373
Query: 714 tttttaaaagatgttagtcattcagcgcttagagacttattacagtttatgtaccaaggt 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tttttaaaagatgttagtcattcagcgcttagagacttattacagtttatgtaccaaggt 433
Query: 774 gaagttaatgttaagcaagaggaattagcgtcgtttattagtaccgcggaacaacttcaa 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaagttaatgttaagcaagaggaattagcgtcgtttattagtaccgcggaacaacttcaa 493
Query: 834 gttaaaggtttaaccggtaatcaaaatgaagaaagttctacgccatccaaaccaaagccg 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gttaaaggtttaaccggtaatcaaaatgaagaaagttctacgccatccaaaccaaagccg 553
Query: 894 acttcgaggccaggcccgaggtcgtcacaacaaaggcaatctgttatgactaagttagag 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 acttcgaggccaggcccgaggtcgtcacaacaaaggcaatctgttatgactaagttagag 613
Query: 954 actgatttagattctaagccctcctcaactccagtagcaattaagagaccaaataggcca 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 actgatttagattctaagccctcctcaactccagtagcaattaagagaccaaataggcca 673
Query: 1014 tcaatagcatcaaataattcgtcgtcatctcaaagtggacctgcgaaaagaaaatgtgtg 1073
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tcaatagcatcaaataattcgtcgtcatctcaaagtggacctgcgaaaagaaaatgtgta 733
Query: 1074 gaccccttagaagccggcccatcaggatcagccaaagaggaatttgtcacgataccagac 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gaccccttagaagccggcccatcaggatcagccaaagaggaatttgtcacgataccagac 793
Query: 1134 gaggatgaaaataatgctgttgcccccaaaatggaacccgaatttgttaatgaaagttta 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gaggatgaaaataatgctgttgcccccaaaatggaacccgaatttgttaatgaaagttta 853
Query: 1194 tgggatgaagacgacgacggcacgaataatgatgaaacgaactttggcgaagatgactcg 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tgggatgaagacgacgacggcacgaataatgatgaaacgaactttggcgaagatgactcg 913
Query: 1254 aatatggaaatgactggttttgatggctcaacgactggcgatggcaatttaactggcgga 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 aatatggaaatgactggttttgatggctcaacgactggcgatggcaatttaactggcgga 973
Query: 1314 ggggagggtggtgctgtgggtgacgcacaag 1344
|||||||||||||||||||||||||||||||
Sbjct: 974 ggggagggtggtgctgtgggtgacgcacaag 1004
Score = 232 bits (117), Expect = 2e-60
Identities = 117/117 (100%)
Strand = Plus / Plus
Query: 281 agcgctcaaacggggaggacttgggatgatagagtgtaaagtgctacattagaaacttat 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 agcgctcaaacggggaggacttgggatgatagagtgtaaagtgctacattagaaacttat 80
Query: 341 atttatttcaaatgtttctaatattgaaattataagtacaaacgttataggataggt 397
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atttatttcaaatgtttctaatattgaaattataagtacaaacgttataggataggt 137
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,092
Number of extensions: 5648
Number of successful extensions: 5648
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5648
Number of HSP's successfully gapped: 2
Length of query: 2848
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2831
Effective length of database: 8,119,229
Effective search space: 22985537299
Effective search space used: 22985537299
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)