BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11220 (UTR included)
(3058 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A2H06 1061 0.0
>BF01013A2H06
Length = 543
Score = 1061 bits (535), Expect = 0.0
Identities = 541/543 (99%)
Strand = Plus / Plus
Query: 944 acatttcactcaaaaggacacgatactcgtaacagcgcagtaccgcttgggatcccttgg 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatttcactcaaaaggacacgatactcgtaacagcgcagtaccgcttgggatcccttgg 60
Query: 1004 tttcttaagtactggggagatcgatgcttctggaaatacaggtttatttgaccttagagc 1063
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcttaagcactggggagatcgatgcttctggaaatacaggtttatttgaccttagagc 120
Query: 1064 cgccatggcatgggtaaaagactacatatcattcttcggtggagacagttccaggataac 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgccatggcatgggtaaaagactacatatcattcttcggtggagacagttccaggataac 180
Query: 1124 tgtaatgggccatggttctggtggtagtgcggcgtctctgatggctttgtcacctgaagg 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtaatgggccatggttctggtggtagtgcggcgtctctgatggctttgtcacctgaagg 240
Query: 1184 tcgttcagcgactggggtggcggctctttctggagcacccctgtccccgggcgctgtcag 1243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 tcgttcagcgactggggtggcggctctttctggagcacccctgtcccctggcgctgtcag 300
Query: 1244 ggagaatccatataaacacgctgaggccctgtcagaaaaaactaattgtcctaaagcacc 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggagaatccatataaacacgctgaggccctgtcagaaaaaactaattgtcctaaagcacc 360
Query: 1304 cccagaaaagcttctaaactgtttaaaatctctacctgctgagaagattataatggctga 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccagaaaagcttctaaactgtttaaaatctctacctgctgagaagattataatggctga 420
Query: 1364 taatgaaattaaaggcgatatggtcgacgtaaactctttcctagacgagctgtccggtcg 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taatgaaattaaaggcgatatggtcgacgtaaactctttcctagacgagctgtccggtcg 480
Query: 1424 ctctggtgcgggttcacgtgtggagggtccgcacgatcttcgttctctgccgccgctggt 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctctggtgcgggttcacgtgtggagggtccgcacgatcttcgttctctgccgccgctggt 540
Query: 1484 gga 1486
|||
Sbjct: 541 gga 543
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 356,662
Number of extensions: 7764
Number of successful extensions: 7764
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7764
Number of HSP's successfully gapped: 1
Length of query: 3058
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3040
Effective length of database: 8,109,745
Effective search space: 24653624800
Effective search space used: 24653624800
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)