BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11223 (UTR included)
(1912 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1579_C1 995 0.0
BF14_2247_C1 527 e-149
>BF14_1579_C1
Length = 1267
Score = 995 bits (502), Expect = 0.0
Identities = 508/510 (99%)
Strand = Plus / Plus
Query: 1122 aaattcgaagaggagagtggagcgggcaccagcggcgctagcacgggggcctccgacacg 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 aaattcgaagaggagagtggagcgggcaccagcggcgctagcacgggggcctccgacacg 817
Query: 1182 gacgctgacgacaaagaccccagcaaggacaaaaagaaaaagaatagatgtgccgtctgc 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gacgctgacgacaaagaccccagcaaggacaaaaagaaaaagaatagatgtgccgtctgc 877
Query: 1242 cgcaagaaggtcggactcacaggtttcgagtgccgctgcggaggtctgttctgcgccgtt 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 cgcaagaaggtcggactcacaggtttcgagtgccgctgcggaggtctgttctgcgccgtt 937
Query: 1302 catcgatacagcgacaagcacgagtgctcgttcgactaccgggagctcggcgcgcaggag 1361
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 938 catcgatacagcgacaagcacgagtgctcgttcgactaccgagagctcggcgcgcaggag 997
Query: 1362 atccgacgcaacaatccagtcgtcgtctcgcagaagatacacaagatatgagcctacctc 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 atccgacgcaacaatccagtcgtcgtctcgcagaagatacacaagatatgagcctacctc 1057
Query: 1422 ccatccccatcccttcccctcccccagcctaccccgtcccatctatcccacccctaccgc 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 ccatccccatcccttcccctcccccagcctaccccgtcccatctatcccacccctaccgc 1117
Query: 1482 catccctcccctccagtccaccggcacgtcggtattcgttgtttaaataaactgtagatc 1541
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 catcccccccctccagtccaccggcacgtcggtattcgttgtttaaataaactgtagatc 1177
Query: 1542 gagcctgtgtctcttattttgcttaacgatatataacatgtattgataacgaacagacag 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 gagcctgtgtctcttattttgcttaacgatatataacatgtattgataacgaacagacag 1237
Query: 1602 agactcgatcacttattatgtttagattga 1631
||||||||||||||||||||||||||||||
Sbjct: 1238 agactcgatcacttattatgtttagattga 1267
Score = 955 bits (482), Expect = 0.0
Identities = 491/494 (99%)
Strand = Plus / Plus
Query: 280 caggccccttcacgatcctgacacagaaagaagtatcagctgtacggctataggagtagc 339
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 caggcccctacacgatcctgacacagaaagaagtatcagctgtacggctataggagtagc 326
Query: 340 cgcgttcgccgacagcgagcgacgcttactagcaaatttttataaggtgtcggggtgcat 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cgcgttcgccgacagcgagcgacgcttactagcaaatttttataaggtgtcggggtgcat 386
Query: 400 tgtactgtgatctgtggacgttgtgttacaaacgagtgcaatatactgatagtgcaatca 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgtactgtgatctgtggacgttgtgttacaaacgagtgcaatatactgatagtgcaatca 446
Query: 460 tattgacattgttgtttaaaaagtgaaaataacgtggaactatggagagggaatcgaatc 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tattgacattgttgtttaaaaagtgaaaataacgtggaactatggagagggaatcgaatc 506
Query: 520 cgatggaggcgttgtgccgatcgggatgtggcttctatggaaacccctcgaccgatggac 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cgatggaggcgttgtgccgatcgggatgtggcttctatggaaacccctcgaccgatggac 566
Query: 580 tttgttcagtttgctttaaggaagccttaaagaagaagcagcagcccccagcgagtacgc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tttgttcagtttgctttaaggaagccttaaagaagaagcagcagcccccagcgagtacgc 626
Query: 640 cgtcagctgtgtcttcttctttcgtgtcgacgcccacgcccacgcccacgccggcgcccg 699
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 cgtcagctgtgtcgtcttcgttcgtgtcgacgcccacgcccacgcccacgccggcgcccg 686
Query: 700 cgcccacgccgctagcagccgctgcgcccacggtgcccacactgccgcaggcgcagcagc 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cgcccacgccgctagcagccgctgcgcccacggtgcccacactgccgcaggcgcagcagc 746
Query: 760 agcagacagacaaa 773
||||||||||||||
Sbjct: 747 agcagacagacaaa 760
>BF14_2247_C1
Length = 909
Score = 527 bits (266), Expect = e-149
Identities = 282/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1628 ttgatttgtggcgagaatttttgcttttaaaagagattgggcgtttgttgcatcacgtcg 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttgatttgtggcgagaatttttgcttttaaaagagattgggcgtttgttgcatcacgtcg 61
Query: 1688 ccggccgctgatgaagtatcactcgaactagtaatgaatactctgcttgatagcggtcga 1747
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccggccgctgatgaagtatcactcgaactagtaatgaatactctgcttgatagcggtcgt 121
Query: 1748 gacgctatcacagaggctagttttgttagtccacagcagtta-ggtcaccctgtatttga 1806
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 122 gacgctatcacagaggctagttttgttagtccacagcagttagggtcaccctgtatttga 181
Query: 1807 gtgctttgataaatgtgtagcgcgtcccgatggtattgacggaaccaattgattgattgt 1866
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 182 gtgctttgataaatgtgtagcgcgtcccgatgctattgacggaaccaattgattgattgt 241
Query: 1867 cgttgtcgttccaactttctcctgactcactttattgaagccgaaa 1912
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 242 cgttgtcgtttcaactttctcctgactcactttattgaagccgaaa 287
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 159,187
Number of extensions: 2605
Number of successful extensions: 2605
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2600
Number of HSP's successfully gapped: 3
Length of query: 1912
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1895
Effective length of database: 8,119,229
Effective search space: 15385938955
Effective search space used: 15385938955
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)