BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11261 (UTR included)
(13,918 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1H02 202 1e-50
BF14_2249_C1 147 6e-34
BF01025A1A12 107 5e-22
>BF01062A1H02
Length = 876
Score = 202 bits (102), Expect = 1e-50
Identities = 272/328 (82%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 13586 aatattagtttcatttcaacattgataatattcgcgcataaagttacagtagtcctatca 13645
|||||||||||||||| ||| |||||||| ||||||||| ||||| || |||||| ||||
Sbjct: 364 aatattagtttcatttaaactttgataatgttcgcgcatgaagttgcactagtccgatca 423
Query: 13646 aaacgagcatatatatattttattaatctctcaactacctctgagccacgaatgtacctt 13705
||| | ||| |||||| | ||| |||||||| ||| || |||||||||| | |||||||
Sbjct: 424 gaactaacatctatatagtatatgaatctctcgactgccgctgagccacggaagtacctt 483
Query: 13706 aaaacaattccgatttgttcatcaccgctttataaaagttatttaaatcggaatatccag 13765
| ||| | | ||| ||||||||| |||| ||| ||||||||||||| ||||| ||||||
Sbjct: 484 agaacgagtacgagctgttcatcagcgctgtatgaaagttatttaaagcggaacatccag 543
Query: 13766 tggagatacaaaaa---ttattattattatttggaaacaacaaataaggaaatcaaaata 13822
|||||| || | ||| ||||||||| || |||||||||| ||||||| | |||||
Sbjct: 544 cggagatgtgaacattcttactattattatgtgaaaacaacaaacaaggaaaaccaaata 603
Query: 13823 acttatttgtgagtacacaacccgctagctaattaaaactatcataatactctttattaa 13882
|||||||||| | |||||| | || ||| ||||||||||||||||||| ||||||||
Sbjct: 604 gcttatttgtgtgaacacaagctgccggcttattaaaactatcataatacattttattaa 663
Query: 13883 aacgaataacataacctttcttttagtt 13910
||||| |||||| |||||||||||||||
Sbjct: 664 aacgagtaacattacctttcttttagtt 691
Score = 168 bits (85), Expect = 2e-40
Identities = 125/137 (91%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 13455 gcgtgcacagagttaggggatagggtaagcagaatatgtttgaaaaaaaaataccaattt 13514
|||||||||||| | ||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 94 gcgtgcacagagattcgggttagggtaagcagaatatgtttgaaaa-aaaataccaattt 152
Query: 13515 tcgtcataatttcctcctctaaaccattaataataatgagatctttcgcaatttttcatt 13574
|| | ||||||||||||||||||||||| |||||||||| ||||||||||| | ||||||
Sbjct: 153 tcataataatttcctcctctaaaccattgataataatgaaatctttcgcaagtattcatt 212
Query: 13575 taaatgaaactaatatt 13591
||||| |||||||||||
Sbjct: 213 taaataaaactaatatt 229
>BF14_2249_C1
Length = 1315
Score = 147 bits (74), Expect = 6e-34
Identities = 202/247 (81%), Gaps = 16/247 (6%)
Strand = Plus / Plus
Query: 13670 aatctctcaactacctctgagccacgaatgtaccttaaaacaattccgatttgttcatca 13729
||||||||||| |||||||||||||| | |||||||||| ||| ||| |||||||||
Sbjct: 529 aatctctcaaccgcctctgagccacgagagaaccttaaaacgattaagatctgttcatca 588
Query: 13730 ccgctttataaaagttatttaaatcggaatatccagtggagatacaaa------aattat 13783
||| ||| |||||||||| ||||||||||||||||||||||| |||| |||||
Sbjct: 589 ccgnttttaaaaagttattaaaatcggaatatccagtggagatccaaacattcttattat 648
Query: 13784 tattattatttggaaacaacaaataaggaaatcaaaataacttatttgtgagtacacaac 13843
||||||||||| |||||||| | |||||| |||||||| |||||||||
Sbjct: 649 tattattatttaaaaacaacaga----------caaataatatatttgtgtgtacacaac 698
Query: 13844 ccgctagctaattaaaactatcataatactctttattaaaacgaataacataacctttct 13903
| ||||||| |||||||| ||||||||||| |||||||||| || |||||| ||||||||
Sbjct: 699 ctgctagcttattaaaacaatcataatactttttattaaaaagagtaacattacctttct 758
Query: 13904 tttagtt 13910
|||||||
Sbjct: 759 tttagtt 765
Score = 93.7 bits (47), Expect = 7e-18
Identities = 115/137 (83%), Gaps = 3/137 (2%)
Strand = Plus / Plus
Query: 13455 gcgtgcacagagttaggggatagggtaagcagaatatgtttgaaaaaaaaataccaattt 13514
|||||||||||| | ||| |||||| |||| |||||||||| |||||| |||| |||||
Sbjct: 232 gcgtgcacagagatttggggtagggtgagcaaaatatgtttggaaaaaatatactaattt 291
Query: 13515 tcgtcataatttcctcctctaaaccattaataataatgagatctttcgcaatttttcatt 13574
| |||| |||||| |||||| |||| |||||||| || |||||| ||| | ||||||
Sbjct: 292 ttatcat---ttcctcttctaaaacattgataataataaggtctttcacaagtattcatt 348
Query: 13575 taaatgaaactaatatt 13591
|||||||||||||||||
Sbjct: 349 taaatgaaactaatatt 365
Score = 73.8 bits (37), Expect = 7e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 13586 aatattagtttcatttcaacattgataatattcgcgcataa 13626
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 469 aatattagtttcatttaaacattgataatattcgcgcataa 509
>BF01025A1A12
Length = 880
Score = 107 bits (54), Expect = 5e-22
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 13586 aatattagtttcatttcaacattgataatattcgcgcataaagttacagtagtcctatca 13645
|||||||||||||||| ||||||||||||||||||| ||||||| |||| ||||| |||
Sbjct: 102 aatattagtttcatttaaacattgataatattcgcgtataaagtgacagcagtccgatct 43
Query: 13646 aaacgagcatatatatattttattaatctctcaactacctct 13687
|| || ||| |||||||||||| |||||||||| |||||||
Sbjct: 42 gaaagaacatctatatattttatgaatctctcaattacctct 1
Score = 101 bits (51), Expect = 3e-20
Identities = 86/97 (88%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 13496 gaaaaaaaaataccaattttcgtcataatttcctcctctaaaccat---taataataatg 13552
||||||| ||||||||||||| |||||| ||||||||||||||||| |||| ||||||
Sbjct: 335 gaaaaaagaataccaattttcatcataacttcctcctctaaaccattgataatcataatg 276
Query: 13553 agatctttcgcaatttttcatttaaatgaaactaata 13589
|||||||| |||| |||||||||||||||||||||
Sbjct: 275 agatcttttacaataattcatttaaatgaaactaata 239
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 160,649
Number of extensions: 18103
Number of successful extensions: 18103
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 18099
Number of HSP's successfully gapped: 8
Length of query: 13918
Length of database: 8,280,457
Length adjustment: 19
Effective length of query: 13899
Effective length of database: 8,100,261
Effective search space: 112585527639
Effective search space used: 112585527639
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 36 (71.9 bits)