BLASTN 2.2.24 [Aug-08-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DPGLEAN11263 (UTR included) (1192 letters) Database: est 9484 sequences; 8,280,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BF01057B2B01 111 3e-24 BF01038B2F08 84 6e-16
>BF01057B2B01 Length = 555 Score = 111 bits (56), Expect = 3e-24 Identities = 123/144 (85%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 962 agtggcgccatctgtgccgtaccaattataatatactacaatccttagaattatctttat 1021 |||||||||||||| ||||||| ||| ||||| ||||| |||||||| |||||| || || Sbjct: 183 agtggcgccatctgcgccgtactaatcataat-tactataatccttacaattattttaat 125 Query: 1022 gacagattgtaatttattataatactgaactattgttattttgtaatggcaacatttaag 1081 ||| |||||||||| |||||| ||||||| ||||| ||||||||||||||||| ||| Sbjct: 124 gactgattgtaattacttataacactgaaccattgtagttttgtaatggcaacatacaag 65 Query: 1082 tggcaccttgtatttgaaaactat 1105 | | |||||||||||||||||| Sbjct: 64 tatctacttgtatttgaaaactat 41 >BF01038B2F08 Length = 786 Score = 83.8 bits (42), Expect = 6e-16 Identities = 106/126 (84%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 954 atgttaccagtggcgccatctgtgccgtaccaattataatatactacaatccttagaatt 1013 ||||||| ||||||||| || |||| | | |||||||| |||||| ||||||||||||| Sbjct: 737 atgttacaagtggcgccctccgtgctgagctaattataacatactataatccttagaatt 678 Query: 1014 atctttatgacagattgtaatttattataatactgaactattgttattttgtaatggcaa 1073 | ||| ||| |||||| ||| |||||||||||| || ||||| ||||| ||||||||| Sbjct: 677 gttcttacgactgattgttattaattataatactggaccattgtaatttt-taatggcaa 619 Query: 1074 cattta 1079 |||||| Sbjct: 618 cattta 613 Database: est Posted date: Jul 14, 2011 2:25 PM Number of letters in database: 8,280,457 Number of sequences in database: 9484 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 9484 Number of Hits to DB: 179,802 Number of extensions: 8705 Number of successful extensions: 8705 Number of sequences better than 1.0e-10: 2 Number of HSP's gapped: 8702 Number of HSP's successfully gapped: 2 Length of query: 1192 Length of database: 8,280,457 Length adjustment: 17 Effective length of query: 1175 Effective length of database: 8,119,229 Effective search space: 9540094075 Effective search space used: 9540094075 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 50 (99.1 bits) S1: 12 (24.3 bits) S2: 34 (67.9 bits)