BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11274 (UTR included)
(1456 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B2H02 759 0.0
>BF01026B2H02
Length = 665
Score = 759 bits (383), Expect = 0.0
Identities = 400/407 (98%)
Strand = Plus / Plus
Query: 641 atttcaagctcagaatgtaagggatataatattatcgacaatgcaagaacaattaatggg 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atttcaagctcagaatgtaagggatataatattatcgacaatgcaagaacaattaatggg 318
Query: 701 gcggcagtatcgctctgatcaagctccgaggtgggctcaatcaatatctaatgctgtacg 760
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 319 gcggcagtatcgctctgatcaagctccgagatgggctcaatcaatatctaatgctgtacg 378
Query: 761 tcagagagttcaggatcttgatatgaagagatataaaatactggtacagactatattgtt 820
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 379 tcagagagttcaggatcttgatatgaagagatataaaatactggttcagactatattgtt 438
Query: 821 agagatgaagggagctgggattaaatgtggccagcgttgtatttgggatcctgagacgga 880
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agagatgaagggagctggaattaaatgtggccagcgttgtatttgggatcctgagacgga 498
Query: 881 cgactatgcggatgagttatttaggaatgacacaatatattgttacactattgtctatgg 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cgactatgcggatgagttatttaggaatgacacaatatattgttacactattgtctatgg 558
Query: 941 tgtttatatgtactgatttgttcaatgttgtttttttcctttaaaccaggttgcacctgc 1000
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 559 tgtttatatgtactgatttgttcnnngttgtttttttcctttaaaccaggttgcacctgc 618
Query: 1001 cagtgttaaacctgtgtggtgccattttgatttttattacataaggc 1047
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 619 cagtgttaaacctgtgtgntgccattttgatttttattacataaggc 665
Score = 317 bits (160), Expect = 3e-86
Identities = 167/170 (98%)
Strand = Plus / Plus
Query: 471 ttagtattcatttaagacaaaaatgaaaatatggcggacgaagaagatgttgtagaagag 530
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ttagtattcatttaagacaaaaatgaaaatatggcggactnngaagatgttgtagaagag 60
Query: 531 gaaccgcaggtacaagaagatagagttagtgagtcaggactgagtccagtggatgttgaa 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaccgcaggtacaagaagatagagttagtgagtcaggactgagtccagtggatgttgaa 120
Query: 591 aaaacacttgcaccacccaaatatgaagtacgtccaggcttgggtgagaa 640
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaacacttgcaccacccaaatatgaagtacgtccaggcttgggtgagaa 170
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,188
Number of extensions: 13100
Number of successful extensions: 13100
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13100
Number of HSP's successfully gapped: 2
Length of query: 1456
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1439
Effective length of database: 8,119,229
Effective search space: 11683570531
Effective search space used: 11683570531
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)