BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11277 (UTR included)
(4444 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A2H03 1507 0.0
BF14_349_C1 1098 0.0
>BF01013A2H03
Length = 830
Score = 1507 bits (760), Expect = 0.0
Identities = 775/780 (99%)
Strand = Plus / Plus
Query: 3009 tatttcagggtcacactgcctaagaaatgtcgcgctgaggaatcatctcgtcagatcata 3068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tatttcagggtcacactgcctaagaaatgtcgcgctgaggaatcatctcgtcagatcata 110
Query: 3069 aaactagcttgcagcatcaaagtgaaaagattacagaagtaccaacaggagtatgagaaa 3128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aaactagcttgcagcatcaaagtgaaaagattacagaagtaccaacaggagtatgagaaa 170
Query: 3129 ttcattaaagaatcagcagataaagagacaattaacgtggagttagaaaggttaaaggtc 3188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ttcattaaagaatcagcagataaagagacaattaacgtggagttagaaaggttaaaggtc 230
Query: 3189 atcaacaatcagctgacccaagagaaggagatgctagagactcaactcaaacaggctcgt 3248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atcaacaatcagctgacccaagagaaggagatgctagagactcaactcaaacaggctcgt 290
Query: 3249 gggaatctcgaggagacacagaaggagtctgtccactacgccgccgtgtctagagactat 3308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gggaatctcgaggagacacagaaggagtctgtccactacgccgccgtgtctagagactat 350
Query: 3309 agggagatatgcgccaggcttgacagacaactgcatcacatacaggattgcgtcaaaggt 3368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agggagatatgcgccaggcttgacagacaactgcatcacatacaggattgcgtcaaaggt 410
Query: 3369 tgtgttaattgcagcgtaaagttagcacagaaggataataaagaagaagcggacgagtct 3428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgtgttaattgcagcgtaaagttagcacagaaggataataaagaagaagcggacgagtct 470
Query: 3429 gagaaggacggcggggagactgccagcgagacggaggcgaggctcaaccagcgggtcaga 3488
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 471 gagaaggacggcggggagactgctagcgagacggaggcgaggctcaagcagcgggtcaga 530
Query: 3489 gacctggagctggaactggcccaggtgaagctggctcatgtacaggcgcagtgcagcaac 3548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gacctggagctggaactggcccaggtgaagctggctcatgtacaggcgcagtgcagcaac 590
Query: 3549 caggaactgagtcaccagctgaacgcggcgctgaacgagatgcaggccgccatgaaccag 3608
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 591 caggaactgagtcaccagctgaacgcggcgctgaatgagatgcaggccgccatgaaccaa 650
Query: 3609 aagcagtcggtgacgccctggctcgtgcggaccctcggttctataatggaggcggcgcag 3668
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aagcagtcgttgacgccctggctcgtgcggaccctcggttctataatggaggcggcgcag 710
Query: 3669 aacagaccgtcgttccagacttacctgcctaatttgaatcaagagcagccatcgtctaca 3728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aacagaccgtcgttccagacttacctgcctaatttgaatcaagagcagccatcgtctaca 770
Query: 3729 cctaggcaggggtcattcagcggtcagggccagagtaccgtgaccctcgaccggcgcgtc 3788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 cctaggcaggggtcattcagcggtcagggccagagtaccgtgaccctcgaccggcgcgtc 830
>BF14_349_C1
Length = 1475
Score = 1098 bits (554), Expect = 0.0
Identities = 581/589 (98%), Gaps = 2/589 (0%)
Strand = Plus / Plus
Query: 3858 gtggaatcgaatatcagtaaggatgcaaaggaaatgaatagacggagccatgacgtcacc 3917
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggaatcgaatatcagtaaggatgcaaaggaaatgaatagacggagccatgacgtcaca 60
Query: 3918 atcgtaaagaatctgtcgatgggttgacctccgagacgcacatggctcgtataagaatcg 3977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcgtaaagaatctgtcgatgggttgacctccgagacgcacatggctcgtataagaatcg 120
Query: 3978 tctctaatatgtaattcttgaattgatattatttatcattattatattgtatgttagtaa 4037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctctaatatgtaattcttgaattgatattatttatcattattatattgtatgttagtaa 180
Query: 4038 atgcacatcatagtataactagtcagacactggcatcaggattacggctatgtaacgtca 4097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgcacatcatagtataactagtcagacactggcatcaggattacggctatgtaacgtca 240
Query: 4098 gccatcttgaatcaagcactatcaaagcctttaaaaatttatatacatgtaat--gtttt 4155
||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 241 gccatcttgaaccaagcactatcaaagcctttaaaaatatatatacatgtaatatgtttt 300
Query: 4156 ttaattccatgaaaaatatatatcactgctatttaagaaatgctaatattttttgggcgc 4215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaattccatgaaaaatatatatcactgctatttaagaaatgctaatattttttgggcgc 360
Query: 4216 ttatattgaaatcttccagaaactcgatcataatttaaagtaccctcgtatcataccaag 4275
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 ttatattgaaatcttccagaaactcgatcgtaatttaaagtaccctcgtatcataccaag 420
Query: 4276 attacacgtgtaattttcgtatggctgaatgttgttgatcatagtgtagtaagcgttccg 4335
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attacacatgtaattttcgtatggctgaatgttgttgatcatagtgtagtaagcgttccg 480
Query: 4336 tttgatgtcatttcataccgatatgtctgcaatcgattgttctgtgataaggtcatgacg 4395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgatgtcatttcataccgatatgtctgcaatcgattgttctgtgataaggtcatgacg 540
Query: 4396 tcatactgatattagtttcgctggtacgaaaagctcatttgtataacat 4444
||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 541 tcatactgatatttgtttcgctggtacgaaaagctcatttgtataacat 589
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 387,779
Number of extensions: 6381
Number of successful extensions: 6381
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6379
Number of HSP's successfully gapped: 2
Length of query: 4444
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4426
Effective length of database: 8,109,745
Effective search space: 35893731370
Effective search space used: 35893731370
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)