BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11297 (UTR included)
(3079 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_18_C1 1780 0.0
BF01020B2F11 652 0.0
>BF14_18_C1
Length = 1794
Score = 1780 bits (898), Expect = 0.0
Identities = 919/926 (99%)
Strand = Plus / Plus
Query: 1650 ggagaggacgttgagagaggaacattctctcataggcaccacgtgctgcatcaccagaag 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagaggacgttgagagaggaacattctctcataggcaccacgtgctgcatcaccagaag 60
Query: 1710 gtcgacaaggccacttattgtccattggctcatctttatccagaccaagctccctacacc 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 gtcgacaaggccacttattgtccattggctcatctttatccagaccaagctccttacacc 120
Query: 1770 gtttgcaacagttcattgtctgaatacggtgtgttgggcttcgaagtgggttactcagta 1829
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 gtttgcaacagttcattgtctgaatacggtgtgttgggcttcgaaatgggttactcagta 180
Query: 1830 acaaacccgaacgctctagtgctatgggaggctcagtttggtgacttcaacaatgtggct 1889
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accaacccgaatgctctagtgctatgggaggctcagtttggtgacttcaacaatgtggct 240
Query: 1890 cagtgtatcattgaccagttcatatcaagcgggcaggccaagtgggtcaggcagtcaggc 1949
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241 cagtgtatcattgaccagttcatatcaagcgggcaggccaagtgggtcaggcagtcgggc 300
Query: 1950 atagtactgcttcaacctcatggaatggagggcatgggccccgaacattcttcagctcgt 2009
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcgtactgcttcaacctcatggaatggagggcatgggccccgaacattcttcagctcgt 360
Query: 2010 ttggagcgcttcttgcaaatgagctccgacgaccccgactacatgccgccggagagtcct 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttggagcgcttcttgcaaatgagctccgacgaccccgactacatgccgccggagagtcct 420
Query: 2070 gactacgaagtccgtcagctccacgactgcaactggatagtagcgaactgttcgaccccg 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gactacgaagtccgtcagctccacgactgcaactggatagtagcgaactgttcgaccccg 480
Query: 2130 gcctccttgttccacatcctccgtcggcagatcgctctgcctttccgtaaacctctaata 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcctccttgttccacatcctccgtcggcagatcgctctgcctttccgtaaacctctaata 540
Query: 2190 ttgatgactcccaaatcactactgagacatcccgaatgcaaatcttcgttcgacgatatg 2249
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 ttgatgactcccaaatcactactgagacatcccgaatgcaaatcttccttcgacgatatg 600
Query: 2250 gtcgatggaaccacattcaaaagattgattcccgaagagggtccggcgtccgagaacccg 2309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcgatggaaccacattcaaaagattgattcccgaagagggtccggcgtccgagaacccg 660
Query: 2310 tctaacgtccgcaagcttgctttctgctccggacgtgtttactacgacctgctgaaacag 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tctaacgtccgcaagcttgctttctgctccggacgtgtttactacgacctgctgaaacag 720
Query: 2370 aggagagaccgcggactggagaaggatatagccatagccagactggagcagatctcgccg 2429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aggagagaccgcggactggagaaggatatagccatagccagactggagcagatctcgccg 780
Query: 2430 ttcccatacgatctgatcaaggctgagatcgcaaagtatccgaacgctcagctggtctgg 2489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttcccatacgatctgatcaaggctgagatcgcaaagtatccgaacgctcagctggtctgg 840
Query: 2490 agtcaggaggaacacaagaacatgggctcctggagttacatcgagccgaggttccgtaca 2549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agtcaggaggaacacaagaacatgggctcctggagttacatcgagccgaggttccgtaca 900
Query: 2550 ctgctgcacaaccagaaacagatctg 2575
||||||||||||||||||||||||||
Sbjct: 901 ctgctgcacaaccagaaacagatctg 926
>BF01020B2F11
Length = 816
Score = 652 bits (329), Expect = 0.0
Identities = 335/337 (99%)
Strand = Plus / Plus
Query: 2239 tcgacgatatggtcgatggaaccacattcaaaagattgattcccgaagagggtccggcgt 2298
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 194 tcgacgatatggtcgatggaaccacgttcaaaagattgattcccgaagagggtccggcgt 253
Query: 2299 ccgagaacccgtctaacgtccgcaagcttgctttctgctccggacgtgtttactacgacc 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccgagaacccgtctaacgtccgcaagcttgctttctgctccggacgtgtttactacgacc 313
Query: 2359 tgctgaaacagaggagagaccgcggactggagaaggatatagccatagccagactggagc 2418
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgctgaagcagaggagagaccgcggactggagaaggatatagccatagccagactggagc 373
Query: 2419 agatctcgccgttcccatacgatctgatcaaggctgagatcgcaaagtatccgaacgctc 2478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agatctcgccgttcccatacgatctgatcaaggctgagatcgcaaagtatccgaacgctc 433
Query: 2479 agctggtctggagtcaggaggaacacaagaacatgggctcctggagttacatcgagccga 2538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agctggtctggagtcaggaggaacacaagaacatgggctcctggagttacatcgagccga 493
Query: 2539 ggttccgtacactgctgcacaaccagaaacagatctg 2575
|||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggttccgtacactgctgcacaaccagaaacagatctg 530
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 383,769
Number of extensions: 16496
Number of successful extensions: 16496
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 16496
Number of HSP's successfully gapped: 2
Length of query: 3079
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3061
Effective length of database: 8,109,745
Effective search space: 24823929445
Effective search space used: 24823929445
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)