BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11302 (UTR included)
(1408 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_412_C1 989 0.0
>BF14_412_C1
Length = 1177
Score = 989 bits (499), Expect = 0.0
Identities = 518/523 (99%), Gaps = 1/523 (0%)
Strand = Plus / Plus
Query: 1 tttatgataatttctataatttatttataacactacctgttaaaatatatgttgtttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tttatgataatttctataatttatttataacactacctgttaaaatatatgttgtttcct 365
Query: 61 atacaatctaaacattttgttatttttggggactgtcattctatgatatgatatttacaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 366 atacaatctaaacattttgttatttttggggactgtcattctatgatatgatatctacaa 425
Query: 121 ttacattccaaatacatatatttttatattatttagggaatgcaatcgattgttttcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttacattccaaatacatatatttttatattatttagggaatgcaatcgattgttttcaat 485
Query: 181 gtaattcatcccagactatggaatgtggcgacacacttatgaaactcgatggtggaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtaattcatcccagactatggaatgtggcgacacacttatgaaactcgatggtggaatat 545
Query: 241 tggagtatagttcttgtgaacatgtttacaatgcacagtattgtattaaacggacaggtt 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 546 tggagtatagttcttgtgaacatgtttacaacgcacagtattgtattaaacggacaggtt 605
Query: 301 gagagatgtgatcaagttgaatattttggcttaaaattatgcacagagctgcacaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gagagatgtgatcaagttgaatattttggcttaaaattatgcacagagctgcacaagaat 665
Query: 361 cacctg-ttttttttttctaattaattcatatttagaacacaatgttaatattaatcaca 419
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cacctgtttttttttttctaattaattcatatttagaacacaatgttaatattaatcaca 725
Query: 420 gtaaattttcaatgtacacaagtgttgccgacatattttctatagtgcactagtatttta 479
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 726 gtaaaatttcaatgtacacaagtgttgccgacatatttactatagtgcactagtatttta 785
Query: 480 ggttccagcacatgcaaggtgatgagtgttgaattttattgtg 522
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ggttccagcacatgcaaggtgatgagtgttgaattttattgtg 828
Score = 83.8 bits (42), Expect = 7e-16
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 520 gtggtattataacgaaaagatattgttcgtcattggatttgg 561
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 gtggtattataacgaaaagatattgttcgtcattggatttgg 934
Score = 73.8 bits (37), Expect = 7e-13
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 795 tattgttcatcattagatttaggaaattattgtaattatgttcaacagccaggggacaaa 854
|||||||| ||||| ||||| || |||||||| ||||||||| | || ||||||||||||
Sbjct: 913 tattgttcgtcattggatttgggtaattattgcaattatgttaagcaaccaggggacaaa 972
Query: 855 ttagaatataggacttgtatttatacatg 883
| ||||| || ||||||||||| |||||
Sbjct: 973 atggaatacagaacttgtatttacacatg 1001
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,093
Number of extensions: 6165
Number of successful extensions: 6165
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6164
Number of HSP's successfully gapped: 3
Length of query: 1408
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1391
Effective length of database: 8,119,229
Effective search space: 11293847539
Effective search space used: 11293847539
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)