BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11319 (UTR included)
(1436 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_47_C1 696 0.0
BF01052B1F12 78 4e-14
BF14_729_C2 76 2e-13
BF01012A1E04 70 1e-11
>BF14_47_C1
Length = 2413
Score = 696 bits (351), Expect = 0.0
Identities = 357/359 (99%)
Strand = Plus / Plus
Query: 521 ggcagcactagaaggcggcactcctgggggtcttgccccggcggagccccagaccggtcc 580
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ggcagcaccagaaggcggcactcctgggggtcttgccccggcggagccccagaccggtcc 116
Query: 581 agatggtgaaatcatcggaggacctcgtactccacaacagattgctgcccaaaggaggct 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 agatggtgaaatcatcggaggacctcgtactccacaacagattgctgcccaaaggaggct 176
Query: 641 acaacagacccaggcgcaagtcgatgaagttgtggatattatgaaatctaacgtcgagaa 700
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 acaacagacccaggcccaagtcgatgaagttgtggatattatgaaatctaacgtcgagaa 236
Query: 701 ggtattagacagagatgccaaactatcagaacttgatgatagagcagacgcgcttcagca 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggtattagacagagatgccaaactatcagaacttgatgatagagcagacgcgcttcagca 296
Query: 761 gggagcatcgcagtttgaacagcaagctaagagtttgaagaacaaattttggcttcaaaa 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gggagcatcgcagtttgaacagcaagctaagagtttgaagaacaaattttggcttcaaaa 356
Query: 821 tcttaagatgatgattattatgggggtgattggtatcgttatcattggactcctgtttg 879
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tcttaagatgatgattattatgggggtgattggtatcgttatcattggactcctgtttg 415
Score = 163 bits (82), Expect = 1e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 879 gttcgaaatcgctccacacccactatgaccggactcagcccagccgtagcggagaataca 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttcgaaatcgctccacacccactatgaccggactcagcccagccgtagcggagaataca 503
Query: 939 acaacacctgtcccaagccatt 960
||||||||||||||||||||||
Sbjct: 504 acaacacctgtcccaagccatt 525
>BF01052B1F12
Length = 785
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1357 tttcgcgagttttattcatttaactgaaactgatattatttggatatactacgcgtgctt 1416
||||||||||||||||||||||| ||||||| ||||| || ||||||||| ||||| ||
Sbjct: 311 tttcgcgagttttattcatttaaatgaaactaatatttttcggatatacttcgcgtcttt 370
Query: 1417 tattttt 1423
|||||||
Sbjct: 371 tattttt 377
>BF14_729_C2
Length = 1289
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 1354 gactttcgcgagttttattcatttaactgaaactgatattatttggatatactacgcgtg 1413
||||||||| ||||||| |||||||| ||||||| |||||| ||||| ||||||||||
Sbjct: 663 gactttcgccagttttaatcatttaaatgaaactagaattattcggataaactacgcgtg 604
Query: 1414 ctttattttt 1423
||||||||||
Sbjct: 603 ctttattttt 594
>BF01012A1E04
Length = 841
Score = 69.9 bits (35), Expect = 1e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 1354 gactttcgcgagttttattcatttaactgaaactgatat-tatttggatatactacgcg 1411
|||||||||||||||||||||||||| ||||||| |||| | || ||||||||||||||
Sbjct: 608 gactttcgcgagttttattcatttaaatgaaactaatatattttcggatatactacgcg 550
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 173,061
Number of extensions: 4507
Number of successful extensions: 4507
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 4506
Number of HSP's successfully gapped: 5
Length of query: 1436
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1419
Effective length of database: 8,119,229
Effective search space: 11521185951
Effective search space used: 11521185951
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)