BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11334 (UTR included)
(1459 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 539 e-153
BF01049A2D11 176 6e-44
BF14_729_C1 155 2e-37
>BF14_729_C3
Length = 2041
Score = 539 bits (272), Expect = e-153
Identities = 391/430 (90%), Gaps = 3/430 (0%)
Strand = Plus / Plus
Query: 495 gacagaatggacaacatcttgaagaagctttccatcaagactatagacaaaccacacaag 554
|||||||| | |||||||||||||||| ||||||| || ||||| |||||||||| |||
Sbjct: 1020 gacagaataggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataag 1079
Query: 555 aaagtgagccaagtctcgagacctatcaagagtaccattcctttgcaacaagcgggtgta 614
|||||||||||| ||| |||||| ||||| |||| ||||||||| |||||||||||||||
Sbjct: 1080 aaagtgagccaattcttgagaccaatcaaaagtaacattcctttacaacaagcgggtgta 1139
Query: 615 tacaaactcgcttgtgactgtggcttgtcatacattggacagacgaagaggagcatcggt 674
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 tacaaactcgactgtgactgtggcttgtcatacattggacagacgaagaggagcatcggt 1199
Query: 675 acgagggtgaaagaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtg 734
|| || || || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 acaagagttaaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtg 1259
Query: 735 tgtgaacacataatggacaaaccaggcc---acattcggtttgataaaccacaaatcctc 791
|||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 1260 tgtgaacacacaatggacaaaccaggccactacattcgttttgataaacctcaaatcctc 1319
Query: 792 gctcgtgaagacaggtacataccgaggttaatccgcgaggctattgaaattaaaaaacat 851
||||| ||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1320 gctcgggaagacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacat 1379
Query: 852 cccaatttcaatagagatgatggctggcaaatatctaatacctgggaccccctccttaaa 911
||||||||||||||||| ||||||||| | |||| || |||||||||||| | ||||||
Sbjct: 1380 cccaatttcaatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaa 1439
Query: 912 aatataaaat 921
||||||||||
Sbjct: 1440 aatataaaat 1449
>BF01049A2D11
Length = 776
Score = 176 bits (89), Expect = 6e-44
Identities = 146/163 (89%), Gaps = 4/163 (2%)
Strand = Plus / Plus
Query: 639 ttgtcatacattggacagacgaagaggagcatcggtacgagggtgaaagaacacatctca 698
|||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 699 gacatcaa-aaacaggcgcgcgtcgaagtcagcagtgtgtgaacacataatggacaaacc 757
|| |||| ||| ||| | | |||||||||||||| |||||||||| ||||||||||||
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 758 aggcc---acattcggtttgataaaccacaaatcctcgctcgt 797
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcgt 776
>BF14_729_C1
Length = 981
Score = 155 bits (78), Expect = 2e-37
Identities = 118/130 (90%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 495 gacagaatggacaacatcttgaagaagctttccatcaagactatagacaaaccacacaag 554
|||||||| | |||||| |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 131 gacagaataggcaacattttgaagaagctttccatcaagactattcacaaaccacataag 72
Query: 555 aaagtgagccaagtctcgagacctatcaagagtaccattcctttgcaacaagcgggtgta 614
|||||||||||| ||| ||||||||||||||||| |||| | ||| ||||||||||||||
Sbjct: 71 aaagtgagccaattcttgagacctatcaagagtaacatt-cattggaacaagcgggtgta 13
Query: 615 tacaaactcg 624
||||||||||
Sbjct: 12 tacaaactcg 3
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 182,788
Number of extensions: 3777
Number of successful extensions: 3777
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3774
Number of HSP's successfully gapped: 4
Length of query: 1459
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1442
Effective length of database: 8,119,229
Effective search space: 11707928218
Effective search space used: 11707928218
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)