BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11338 (UTR included)
(2794 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A1H11 1074 0.0
>BF01026A1H11
Length = 737
Score = 1074 bits (542), Expect = 0.0
Identities = 585/598 (97%), Gaps = 1/598 (0%)
Strand = Plus / Plus
Query: 2198 ggaagacgagacagtggctcgcatgctgcacacacacaccatcgaccaggtcatcaaaca 2257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ggaagacgagacagtggctcgcatgctgcacacacacaccatcgaccaggtcatcaaaca 70
Query: 2258 catacttgcccaagtcgctgatgatgtacagaagtgattgctcatgttgcatgaacatgt 2317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 catacttgcccaagtcgctgatgatgtacagaagtgattgctcatgttgcatgaacatgt 130
Query: 2318 tcgctgcggtcattaaagtatattcttaacccatatt-gtattatcatactacatataaa 2376
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 131 tcgctgcggtcattgaagtatattcttaacccatatttgtattatcatactacatataaa 190
Query: 2377 gcttttccagttttccatctgtagatttcatgcgatagcatcaatttaggtgtaggaaaa 2436
|||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||
Sbjct: 191 gcttttccagttttccatctgtaggtttcatgtgatagcatcgatttaggtgtaggaaaa 250
Query: 2437 actgactatgctctctatgtgatatgatgctacaaatttctggaacagagaaccaatgtt 2496
||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 251 actgattatgctctctatgtgatatgatggtacaaatttctggtacagagaactaatgtt 310
Query: 2497 ggaagttctgattctatggagtatagactatagggtaattaatttatagctattttccta 2556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggaagttctgattctatggagtatagactatagggtaattaatttatagctattttccta 370
Query: 2557 tcagttagttgaatatatttactaagtttttatatgaaatacatatatgtttatcaaaat 2616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tcagttagttgaatatatttactaagtttttatatgaaatacatatatgtttatcaaaat 430
Query: 2617 tgcttcatatcatggaacatccaataattttttgatatgagtataaaaatatattgctta 2676
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgcttcatatcacggaatatccaataattttttgatatgagtataaaaatatattgctta 490
Query: 2677 agattacaaaaaaattaatttaaaataccgttgatattttaaataatttaaaggtgacgt 2736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agattacaaaaaaattaatttaaaataccgttgatattttaaataatttaaaggtgacgt 550
Query: 2737 tactacaacaccaatgatcgctgtaagaaatatttcaatattaatagttgttaataaa 2794
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 551 tactacaacaccaatgatcgctgtaagaaatatttcaatattaatagccgttaataaa 608
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 312,835
Number of extensions: 6332
Number of successful extensions: 6332
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6331
Number of HSP's successfully gapped: 1
Length of query: 2794
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2777
Effective length of database: 8,119,229
Effective search space: 22547098933
Effective search space used: 22547098933
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)