BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11343 (UTR included)
(1738 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A2H07 1429 0.0
>BF01049A2H07
Length = 757
Score = 1429 bits (721), Expect = 0.0
Identities = 748/757 (98%)
Strand = Plus / Plus
Query: 284 ccactgagtgtttagtgtagatagttgacaaacttttcttgtttattcaattaaaacttc 343
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccactgactgtttagtgttgatagttgacaaacttttcttgtttattcaattaaaacttc 60
Query: 344 atcatcaaaataattatttataaatagtcggtaaattagtattataagcaagatgatgcc 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcatcaaaataattatttataaatagtcggtaaattagtattataagcaagatgatgcc 120
Query: 404 tggtaggatcggccaccttcctatagcttctgaaaatccactcggtttatcttggcatga 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggtaggatcggccaccttcctatagcttctgaaaatccactcggtttatcttggcatga 180
Query: 464 ctccgcttggataccatcgctcaatccatctaatattatggattatttttctgaaagatc 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccgcttggataccatcgctcaatccatctaatattatggattatttttctgaaagatc 240
Query: 524 aaatcccttctttgaccgcacgtgtaacaacgaagtagttaagatgcaacgtctaagcat 583
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 241 aaatcccttctttgaccgcacgtgtaacaacgaagtagtaaagatgcaacgtctcagcat 300
Query: 584 ggatcaactgcaaaatatgacaggtctagaatatatactactgcatgtgcaagagccaat 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggatcaactgcaaaatatgacaggtctagaatatatactactgcatgtgcaagagccaat 360
Query: 644 tttatatgttatcaggaagcagcacagacagagtccgatgcaaacaatccctcttgcaga 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttatatgttatcaggaagcagcacagacagagtccgatgcaaacaatccctcttgcaga 420
Query: 704 ttattatattatagctggaatagtgtatcaggcccctgacctcgccagtgtgttaaattc 763
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 ttattatattatagctggaatagtatatcaggcccctgacctcgccagtgtgttaaattc 480
Query: 764 aagaattttatcagcagtccatcatttacaatgttcattcgaggaaacaatgacttattc 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagaattttatcagcagtccatcatttacaatgttcattcgaggaaacaatgacttattc 540
Query: 824 caaatatcatccaagtaaaggctattggtgggatcataaaaataaaacaggcccattcaa 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caaatatcatccaagtaaaggctattggtgggatcataaaaataaaacaggcccattcaa 600
Query: 884 tgttggtcaatcagccccaaaggaagtatccagcacccctaaagaggaaccctccaccct 943
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 601 tgttggtcaatcagctccaaaggaagtatccagcacccctaaagaggaaccctccactct 660
Query: 944 gttccaaagacagagggtggacatgttattagcggagcttgtgagacagtttcctttacc 1003
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 661 gttccaaagacagagggtggacatgttgttagcggagcttgtgagacagttccctttacc 720
Query: 1004 agtaacccagacggctgctaatcagaatggtgttacc 1040
|||||||||||||||||||||||||||||||||||||
Sbjct: 721 agtaacccagacggctgctaatcagaatggtgttacc 757
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,634
Number of extensions: 22553
Number of successful extensions: 22553
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22553
Number of HSP's successfully gapped: 1
Length of query: 1738
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1721
Effective length of database: 8,119,229
Effective search space: 13973193109
Effective search space used: 13973193109
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)