BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11350 (UTR included)
(3088 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A2B06 1429 0.0
>BF01056A2B06
Length = 753
Score = 1429 bits (721), Expect = 0.0
Identities = 745/753 (98%)
Strand = Plus / Plus
Query: 1437 atcttggtgcccaaagaggccggccaagtagtgaacaagaataggttcgaagaagacttt 1496
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcttggtgcccaaagaggccggccaagtagtgaacaagaataggttcgaagaagacttc 60
Query: 1497 accggtggggaaataattatgcccagcaagaaccctaagccagaggactatgagctattg 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accggtggggaaataattatgcccagcaagaaccctaagccagaggactatgagctattg 120
Query: 1557 ttcagtgggaacagcgatgacacttttagactaggaatcactgtcactaagaaaacgctt 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcagtgggaacagcgatgacacttttagactaggaatcactgtcactaagaaaacgctt 180
Query: 1617 aagttatacacagacttctattcatcggacattctgatagcgtcaccgctcgggctccgc 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagttatacacagacttctattcatcggacattctgatagcgtcaccgctcgggctccgc 240
Query: 1677 atgatagttggggcggagggcgaggaggacagagactatgacttcctggcttcgatagaa 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgatagttggggcggagggcgaggaggacagagactatgacttcctggcttcgatagaa 300
Query: 1737 atactcgtgatggaccaagctgatgttttcctgatgcagaactgggatcacctgttacac 1796
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 atactcgtgatggaccaagctgacgttttcctgatgcagaactgggatcacctgttacac 360
Query: 1797 gtcctggaccacctgcacctgcagccgaggaaaactcatgatacagatttttcaagagtc 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcctggaccacctgcacctgcagccgaggaaaactcatgatacagatttttcaagagtc 420
Query: 1857 cgtctttgggcagtcaacggctggtctaaatattacagacagaacttgatattttcatcg 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtctttgggcagtcaacggctggtctaaatattacagacagaacttgatattttcatcg 480
Query: 1917 gtgtcattgccggagataaaatctgttgttaacaaaaaatgccagaactacgctgggaag 1976
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 481 gtgtcattgccggagataaaatctgttgtgaacaaaaaatgccagaactacgctgggaag 540
Query: 1977 gtgctggttgtgaatcccccagaagtcggcagtatacaacaggtcttggtccaggtgccg 2036
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 541 gtgctggttgtgaatcccccagaagttggcagtatacaacaggtcttggtccaggtgccg 600
Query: 2037 caattatttcacaggttcaatgccgcaagtcccttagcgtcagtcgagtctaggtttgaa 2096
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 601 caattatttcacaggttcaatgccgcaagccccttagcgtcagtcgagtctaggtttgaa 660
Query: 2097 tacttcgtcaaagaagtcctgccgaaacagcgtgaccccctgatgagtcacactctcata 2156
||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 661 tacttcgtcaaagaaatcctgccgaaacaacgtgaccctctgatgagtcacactctcata 720
Query: 2157 tacgtaccaagttattttgattttgttagaata 2189
|||||||||||||||||||||||||||||||||
Sbjct: 721 tacgtaccaagttattttgattttgttagaata 753
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 429,442
Number of extensions: 10358
Number of successful extensions: 10358
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10358
Number of HSP's successfully gapped: 1
Length of query: 3088
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3070
Effective length of database: 8,109,745
Effective search space: 24896917150
Effective search space used: 24896917150
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)