BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11355 (UTR included)
(1894 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2B01 759 0.0
>BF01054B2B01
Length = 726
Score = 759 bits (383), Expect = 0.0
Identities = 383/383 (100%)
Strand = Plus / Plus
Query: 702 cagcgctcgcgcggcttcggcttcatcacgttccaggaggcggcgtccgtggacaaggtg 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cagcgctcgcgcggcttcggcttcatcacgttccaggaggcggcgtccgtggacaaggtg 393
Query: 762 ctggcggtgcccgtccacacgctggacggcaagaggatcgaccccaagcacgccacgccc 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctggcggtgcccgtccacacgctggacggcaagaggatcgaccccaagcacgccacgccc 453
Query: 822 aagtcggcgcccaagccggccaagaccaagaagatcttcgtgggcggcgtcggccaggac 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aagtcggcgcccaagccggccaagaccaagaagatcttcgtgggcggcgtcggccaggac 513
Query: 882 acgtcggcggacgaggtgcgcgcctacttcgcgcagttcggagccgtggaggacgccgtc 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 acgtcggcggacgaggtgcgcgcctacttcgcgcagttcggagccgtggaggacgccgtc 573
Query: 942 atgctcatggaccagcagaccaagagacaccgcggcttcggcttcgtcaccttccactcc 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atgctcatggaccagcagaccaagagacaccgcggcttcggcttcgtcaccttccactcc 633
Query: 1002 gaggaggccgtggagcgcgtgtgcgacatccacttccacaccatcaagaacaagaaggtg 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gaggaggccgtggagcgcgtgtgcgacatccacttccacaccatcaagaacaagaaggtg 693
Query: 1062 gagtgcaagcgagctcagcccaa 1084
|||||||||||||||||||||||
Sbjct: 694 gagtgcaagcgagctcagcccaa 716
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 213,348
Number of extensions: 6006
Number of successful extensions: 6006
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6004
Number of HSP's successfully gapped: 1
Length of query: 1894
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1877
Effective length of database: 8,119,229
Effective search space: 15239792833
Effective search space used: 15239792833
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)