BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11370 (UTR included)
(1714 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_999_C1 1308 0.0
>BF14_999_C1
Length = 907
Score = 1308 bits (660), Expect = 0.0
Identities = 681/688 (98%)
Strand = Plus / Plus
Query: 471 atcaagatttcatccacgacggaggaaaccatgaaggaaacgccaactccggaagtagat 530
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 atcaagatttcatccacgacggaggaaaccatgaaggaaacaccaactccggaagtagat 61
Query: 531 actagaaatgtcgtgaagaacagagaacttctttatcgaatgattataagtcagttacat 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 actagaaatgtcgtgaagaacagagaacttctttatcgaatgattataagtcagttacat 121
Query: 591 tacgatggtttccaacctatagccgcgactctatcagccgctgtacacgcagacccaccg 650
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tacgatggtttccaacctatagccgcgactctatcagccgctgtacacgcagacccacca 181
Query: 651 tgccctccgagcgacagattattaaatctaatgatggtcggtctacaacatgaaccggac 710
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgccctccgagcgacagactattaaatctaatgatggtcggtctacaacatgaaccggac 241
Query: 711 cggaaggacaggctggcggcatccagcggggcggaacatctgctgggaactaccggcttc 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cggaaggacaggctggcggcatccagcggggcggaacatctgctgggaactaccggcttc 301
Query: 771 gatctcgagtttgagatggacgcgtcctcgctcgcccctgagccggccacgtacgagacg 830
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 302 gatctcgagtttgagatggacgcgtcctcgctcgccccagagccggccacgtacgagacg 361
Query: 831 gcgtatgtgacgtcacacaagatgtcttgtagggccggagcgttcagcgcctgtggtcag 890
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 362 gcgtatgtgacgtcacacaagatgtcttgtagggccggagcgttcagcgcctgtggccag 421
Query: 891 ctggtggctaccggcagtgtggatgctagcattaagattctggacgtggagcggatgttg 950
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 422 ctggtggctaccggcagtgttgatgctagtattaagattctggacgtggagcggatgttg 481
Query: 951 gctaaatcagctcccgaggaagttgatcccgggagagagcagcagggacatccggtgata 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gctaaatcagctcccgaggaagttgatcccgggagagagcagcagggacatccggtgata 541
Query: 1011 cgaacattatacgatcacaccgacgagataaccgccctggatttccatccccgggaacag 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cgaacattatacgatcacaccgacgagataaccgccctggatttccatccccgggaacag 601
Query: 1071 atcctggtatcagcgtcccgggactgctgcatcaaactgttcgacataaccaaagcctcg 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atcctggtatcagcgtcccgggactgctgcatcaaactgttcgacataaccaaagcctcg 661
Query: 1131 gccaagaaagcctataagtccattacgg 1158
||||||||||||||||||||||||||||
Sbjct: 662 gccaagaaagcctataagtccattacgg 689
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 160,287
Number of extensions: 2710
Number of successful extensions: 2710
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2710
Number of HSP's successfully gapped: 1
Length of query: 1714
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1697
Effective length of database: 8,119,229
Effective search space: 13778331613
Effective search space used: 13778331613
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)