BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11385 (UTR included)
(2554 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1A04 1520 0.0
BF01039A2B06 1132 0.0
BF01044A1D01 68 8e-11
>BF01062A1A04
Length = 787
Score = 1520 bits (767), Expect = 0.0
Identities = 782/787 (99%)
Strand = Plus / Plus
Query: 546 gacgaacctccgtcgaagaaatcagcgccgtctatacgacttcatgccggcttcaagtgg 605
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gacgaacctccgtcgaagaaatcagcgccgtcgatacgacttcatgccggcttcaagtgg 60
Query: 606 aacctgcaggcgctggctaaggccgcggatgctgtggagtgcggagataaatctccagtg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacctgcaggcgctggctaaggccgcggatgctgtggagtgcggagataaatctccagtg 120
Query: 666 tccgccctcaatgagctcggcgtccgagtgtcctacaccgtcctgcgacactcgggacca 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccgccctcaatgagctcggcgtccgagtgtcctacaccgtcctgcgacactcgggacca 180
Query: 726 gctcattgtccaagcttcactgtagccgtcaccgtggcggacatgacctttgagggctgg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctcattgtccaagcttcactgtagccgtcaccgtggcggacatgacctttgagggctgg 240
Query: 786 ggtcacagtaaacgcgaggcgcgcgcctccgccgcccgtgcgtgcttgggggcgttgtta 845
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 241 ggtcacagtaaacgcgaggcgcgcgcctctgccgcccgtgcgtgcttgggggcgttttta 300
Query: 846 gcacgtgcggggcgagtgctcggcgccccgggaccgcagcccgacttcaccagcgacgaa 905
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcacgtgcggggcgggtgctcggcgccccgggaccgcagcccgacttcaccagcgacgaa 360
Query: 906 ccaccgaaatttcctgtctcggagttccagtgcttggaaaccaagatacagcagcaggag 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaccgaaatttcctgtctcggagttccagtgcttggaaaccaagatacagcagcaggag 420
Query: 966 gccaacaacaaaccatcacctccgcccggtcttttcggcgcgtccgtcgttcctgtccac 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccaacaacaaaccatcacctccgcccggtcttttcggcgcgtccgtcgttcctgtccac 480
Query: 1026 aagagcccaataaacacgctgtacgagaactatcccggcctgacgttcacttgcacctat 1085
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 481 aagagcccaataaacacgctgtacgagaactatcccggcctgacgttcacttgcacttat 540
Query: 1086 ggcgatggcacgccattaaatgcaccacaagctcctatgcagctcagccatagcatgagg 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcgatggcacgccattaaatgcaccacaagctcctatgcagctcagccatagcatgagg 600
Query: 1146 ttcaaggtcgtctgtcaaataaaggacaagaggttcgaaggttacggctccagtaaaaag 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcaaggtcgtctgtcaaataaaggacaagaggttcgaaggttacggctccagtaaaaag 660
Query: 1206 cttgccaaactggcagcggctcgtgtggcgctgggcgagctgactcacgtcatcaaagac 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttgccaaactggcagcggctcgtgtggcgctgggcgagctgactcacgtcatcaaagac 720
Query: 1266 accaacgaacagtcgcgagcgctcgcactgccacagcttttggctgatcacgtcgctaaa 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 accaacgaacagtcgcgagcgctcgcactgccacagcttttggctgatcacgtcgctaaa 780
Query: 1326 ttggtga 1332
|||||||
Sbjct: 781 ttggtga 787
>BF01039A2B06
Length = 759
Score = 1132 bits (571), Expect = 0.0
Identities = 580/583 (99%)
Strand = Plus / Plus
Query: 1435 aggtgatagctgtcactactgggaccaaatgtgtctccggggaacacatgtctgtgaggg 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 aggtgatagctgtcactactgggaccaaatgtgtctccggggaacacatgtctgtgaggg 153
Query: 1495 gacgggccgttaatgactgtcacgctgaggtcgcagccagacggtgtttccaaagacatt 1554
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 154 gacgggctgttaatgactgtcatgctgaggtcgcagccagacggtgtttccaaagacatt 213
Query: 1555 tatacgcccagctcctcatgtacgcgaactcagaggacccgtcggctctcataccggagt 1614
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 214 tatacgcccagctcctcatgtacgcgaactcagaggacccgtcggctctcatcccggagt 273
Query: 1615 cagacctggaaccggtgccaggtggtggctaccagctgcgaccggacaggcaggtccact 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cagacctggaaccggtgccaggtggtggctaccagctgcgaccggacaggcaggtccact 333
Query: 1675 tgtacgtgtccaccgccccctgcggcgatggcaggatcttcagccctcacgaacaccatg 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgtacgtgtccaccgccccctgcggcgatggcaggatcttcagccctcacgaacaccatg 393
Query: 1735 acactgaacccgacaggcatcctaataggttggcgcgcggccagctgaggacgaagatag 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acactgaacccgacaggcatcctaataggttggcgcgcggccagctgaggacgaagatag 453
Query: 1795 agtctggcgaggggaccatacccgtgaagaacagcaccaacatcgtgcagacctgggacg 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agtctggcgaggggaccatacccgtgaagaacagcaccaacatcgtgcagacctgggacg 513
Query: 1855 gagtgctgcagggcgagcgtctcttgactatgtcctgttcagacaaggtcgctcgctggt 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gagtgctgcagggcgagcgtctcttgactatgtcctgttcagacaaggtcgctcgctggt 573
Query: 1915 gtgtggttggtctccagggggcgctgctgtctaggctcatgagaccggtctacctgaact 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gtgtggttggtctccagggggcgctgctgtctaggctcatgagaccggtctacctgaact 633
Query: 1975 cactggtgctggcttccctacttcacactcaccatctgtaccg 2017
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cactggtgctggcttccctacttcacactcaccatctgtaccg 676
>BF01044A1D01
Length = 742
Score = 67.9 bits (34), Expect = 8e-11
Identities = 44/46 (95%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 2290 ataaatatataaatatatatatatatata-atatatatatatatat 2334
||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 64 ataaatatatatatatatatatatatatatatatatatatatatat 19
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 357,977
Number of extensions: 24076
Number of successful extensions: 24076
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 24055
Number of HSP's successfully gapped: 3
Length of query: 2554
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2537
Effective length of database: 8,119,229
Effective search space: 20598483973
Effective search space used: 20598483973
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)