BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11387 (UTR included)
(2263 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B2H08 1441 0.0
BF14_705_C1 1267 0.0
BF01048A2C11 1164 0.0
>BF01040B2H08
Length = 782
Score = 1441 bits (727), Expect = 0.0
Identities = 766/782 (97%)
Strand = Plus / Plus
Query: 412 tgtttttaagcgttatattttggaaatagtggttaaaattaagatattcctatataattt 471
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 tgtttttttgcgttatattttggaaatacnnnttaaaattaagatattcctatataattt 60
Query: 472 atcgcacaattttagttaattcaattataatggccgctcagcccatatacaaccctgtaa 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcgcacaattttagttaattcaattataatggccgctcagcccatatacaaccctgtaa 120
Query: 532 tcccatgtgtccacccgatccctggtggcttgttccccggtcgcatgataaggttccaag 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcccatgtgtccacccgatccctggtggcttgttccccggtcgcatgataaggttccaag 180
Query: 592 ggagtgtaccgcccggcgcccaacgattcgcgatcaatttccaatgcggtccgaacactg 651
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 ggagtgtaccgcccggcgcccaacgattcgcgatcaatttccaatgcggtcccaacactg 240
Query: 652 atccccgggacgacatcgccctccatctcaacttccgcttcgtggagatgtgcgtcgtta 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atccccgggacgacatcgccctccatctcaacttccgcttcgtggagatgtgcgtcgtta 300
Query: 712 ggaaccacttgacggcgatgagctggggggtggaggagaccaacggcggcatgcctctag 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaaccacttgacggcgatgagctggggggtggaggagaccaacggcggcatgcctctag 360
Query: 772 tgcgaggggaggctttcgaggccctggttctgtgtgagccgcagtccatcaaggtcgcgc 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcgaggggaggctttcgaggccctggttctgtgtgagccgcagtccatcaaggtcgcgc 420
Query: 832 tgaatggggtgcacttctgtgagtttccgcatcgtatacccttccaaaggatcagtcacc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaatggggtgcacttctgtgagtttccgcatcgtatacccttccaaaggatcagtcacc 480
Query: 892 tgaccgtggacggtgacgtcatgctgcagttcgtcggcttcgagggagcccagccaagcc 951
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 tgaccgtggacggtgacgtcatgctgcaattcgtcggcttcgagggagcccagccaagcc 540
Query: 952 agatgtacatggcggaacctccatcatatgccagctatggcgctccgccctcgtacggcg 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agatgtacatggcggaacctccatcatatgccagctatggcgctccgccctcgtacggcg 600
Query: 1012 cccccggctatggagcaccccaaggtggtttcggtggagcggtacccccacaatacgcgg 1071
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 601 cccccggctatggagcaccccaaggtggtttcggtggagtggtacccccacaatacgcgg 660
Query: 1072 gcgcccaaacagtaccccagtatactcaagagcgtcgtggtatgggaaccggggcggccg 1131
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gggcccaaacagtaccccagtatactcaagagcgtcgtggtatgggaaccggggcggccg 720
Query: 1132 tgggattgggcgttggggccctggccgctggtgggctggcgggttatgcactaggcgggg 1191
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 721 tgggattgggcgnnngggccctgnnngctggtgggctggcgggttatgcactaggcgggg 780
Query: 1192 gc 1193
||
Sbjct: 781 gc 782
>BF14_705_C1
Length = 1098
Score = 1267 bits (639), Expect = 0.0
Identities = 651/655 (99%)
Strand = Plus / Plus
Query: 382 tatatatattagtgaataaggcgtatccggtgtttttaagcgttatattttggaaatagt 441
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6 tatatatattagtgaataaggcgtatccggtgttttttagcgttatattttggaaatagt 65
Query: 442 ggttaaaattaagatattcctatataatttatcgcacaattttagttaattcaattataa 501
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 66 ggttaaaattaagatattcctatatattttatcgcacaattttagttaattcaattataa 125
Query: 502 tggccgctcagcccatatacaaccctgtaatcccatgtgtccacccgatccctggtggct 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tggccgctcagcccatatacaaccctgtaatcccatgtgtccacccgatccctggtggct 185
Query: 562 tgttccccggtcgcatgataaggttccaagggagtgtaccgcccggcgcccaacgattcg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tgttccccggtcgcatgataaggttccaagggagtgtaccgcccggcgcccaacgattcg 245
Query: 622 cgatcaatttccaatgcggtccgaacactgatccccgggacgacatcgccctccatctca 681
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 246 cgatcaatttccaatgcggtcccaacactgatccccgggacgacatcgccctccatctca 305
Query: 682 acttccgcttcgtggagatgtgcgtcgttaggaaccacttgacggcgatgagctgggggg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 acttccgcttcgtggagatgtgcgtcgttaggaaccacttgacggcgatgagctgggggg 365
Query: 742 tggaggagaccaacggcggcatgcctctagtgcgaggggaggctttcgaggccctggttc 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tggaggagaccaacggcggcatgcctctagtgcgaggggaggctttcgaggccctggttc 425
Query: 802 tgtgtgagccgcagtccatcaaggtcgcgctgaatggggtgcacttctgtgagtttccgc 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgtgtgagccgcagtccatcaaggtcgcgctgaatggggtgcacttctgtgagtttccgc 485
Query: 862 atcgtatacccttccaaaggatcagtcacctgaccgtggacggtgacgtcatgctgcagt 921
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 486 atcgtatacccttccaaaggatcagtcacctgaccgtggacggtgacgtaatgctgcagt 545
Query: 922 tcgtcggcttcgagggagcccagccaagccagatgtacatggcggaacctccatcatatg 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcgtcggcttcgagggagcccagccaagccagatgtacatggcggaacctccatcatatg 605
Query: 982 ccagctatggcgctccgccctcgtacggcgcccccggctatggagcaccccaagg 1036
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ccagctatggcgctccgccctcgtacggcgcccccggctatggagcaccccaagg 660
>BF01048A2C11
Length = 791
Score = 1164 bits (587), Expect = 0.0
Identities = 674/700 (96%), Gaps = 6/700 (0%)
Strand = Plus / Plus
Query: 1562 aggttacccaccccaaggacagggatatccaccttacggtcaagactacggtcaagggta 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggttacccaccccaaggacagggatatccaccttacggtcaagactacggtcaagggta 60
Query: 1622 cccacctcagggcccagggtatccacctcaaggaccaggatatccgggatatggccaagg 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccacctcagggcccagggtatccacctcaaggaccaggatatccgggatatggccaagg 120
Query: 1682 atacccaccacagggctaccctggtcaaggacctccaggcacgttttcacagaattatca 1741
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 atacccaccacagggctaccctggtcaaggacctccaggcacgttttcacggaattatca 180
Query: 1742 atttttgctacataattt-gtaaagcagtccgagttgtcgctagtttttctttgggtaga 1800
||||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttttgctgcacagttttgtaaagcagtccgagttgtcgctagtttttctttgggtaga 240
Query: 1801 attataaaaaaattttgtctcttcgttttgagcgatgtacgctatacattttcctgttta 1860
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attataaaaaa-ttttgtctcttcgttttgagcgatgtacgctatacattttcctgttta 299
Query: 1861 taagatcatcgattgattcaatttaaagccacgacggacatacaaacactgctattttag 1920
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 300 taagatcatcgattgattcaatttaaagccacgacggacataca----ctgctatttaag 355
Query: 1921 taacaacctcatttttcgtgttttattgtttcaactaaaaagtacgttttgcgaagatct 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 356 taacaacctcatttttcgtgttttattgtttcaactaaaaagtacgttttgcggagatct 415
Query: 1981 ttaaatttctaatttggtaacaaagaagttgcgtgtggattgtttgtagaaagagttagg 2040
|| | ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 416 tttagtttctaatttgctgacaaagaagttgcgtgtggattgtttgtagacagagttagg 475
Query: 2041 tactttacaagacatggtctctacaagcgttcagaggaacttcaagcgaaatacattaca 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tactttacaagacatggtctctacaagcgttcagaggaacttcaagcgaaatacattaca 535
Query: 2101 tgctaatcttaaatctacaaacgaaagttctgtcgttgaacgacaaatatatatatacat 2160
||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||
Sbjct: 536 tgctaatcttaaatctacaaacgaatgttatgacgttgaacgacaaatatatatatacat 595
Query: 2161 atatccggctgatttcgttcctttttctgatttaaaagtttccttaaaatcaatccagta 2220
|||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 596 atatccagctgatttcgttccttgttctgatttaaaagtttcgttaaaatcaatccagta 655
Query: 2221 ttttttgtaggacttacataaaaataagtctgttcttctt 2260
|||||||||||||| ||||||||||||||| ||||||||
Sbjct: 656 ctttttgtaggacttgcataaaaataagtctattcttctt 695
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,571
Number of extensions: 13256
Number of successful extensions: 13256
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 13253
Number of HSP's successfully gapped: 3
Length of query: 2263
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2246
Effective length of database: 8,119,229
Effective search space: 18235788334
Effective search space used: 18235788334
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)