BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11401 (UTR included)
(1339 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1139_C1 961 0.0
>BF14_1139_C1
Length = 516
Score = 961 bits (485), Expect = 0.0
Identities = 488/489 (99%)
Strand = Plus / Plus
Query: 447 cttgttctctcggagctaaggccacttggcgacttgcactaaatatcaacaaaaatggca 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cttgttctctcggagctaaggccacttggcgacttgcactaaatatcaacaaaaatggca 70
Query: 507 tcaaaggctgaattagcttgtgtatactctgctctcatcctcgttgacgacgatgtcgca 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcaaaggctgaattagcttgtgtatactctgctctcatcctcgttgacgacgatgtcgca 130
Query: 567 gttaccggtgagaaaatctcaaccatcttgaaggcggctaacgttgacatcgagccatac 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gttaccggtgagaaaatctcaaccatcttgaaggcggctaacgttgacatcgagccatac 190
Query: 627 tggccaggtttgttcgccaaggctttggagggtgtgaacgttcgtgacctgatcactaac 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tggccaggtttgttcgccaaggctttggagggtgtgaacgttcgtgacctgatcactaac 250
Query: 687 atcggttccggtgtcggtgctgccccggccggtggagcgccagccgcagcctcagctgct 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atcggttccggtgtcggtgctgccccggccggtggagcgccagccgcagcctcagctgct 310
Query: 747 gctgcgcctgccgctgaagccgccaaggaggaaaagaaggaagaggaacccgaagagtct 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gctgcgcctgccgctgaagccgccaaggaggaaaagaaggaagaggaacccgaagagtct 370
Query: 807 gacgatgacatgggcttcggtctctttgactaaaaagcttttaacaagctttggtattcc 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gacgatgacatgggcttcggtctctttgactaaaaagcttttaacaagctttggtattcc 430
Query: 867 atagtaagctttataaagctcctttagttgtaagggaaacttaataaaaaacatataaaa 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atagtaagctttataaagctcctttagttgtaagggaaacttaataaaaaacatataaaa 490
Query: 927 acagaaaaa 935
||| |||||
Sbjct: 491 acaaaaaaa 499
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,277
Number of extensions: 5015
Number of successful extensions: 5015
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5015
Number of HSP's successfully gapped: 1
Length of query: 1339
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1322
Effective length of database: 8,119,229
Effective search space: 10733620738
Effective search space used: 10733620738
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)