BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11402 (UTR included)
(1439 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B2B08 926 0.0
>BF01011B2B08
Length = 778
Score = 926 bits (467), Expect = 0.0
Identities = 476/479 (99%)
Strand = Plus / Plus
Query: 4 tgcaggacctattgaccaatattgcgaaaagtttacagaattacaaaaagtactgtgtct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgcaggacctattgaccaatattgcgaaaagtttacagaattacaaaaagtactgtgtct 358
Query: 64 ttctaagtacagctacatcattaattgaactgttgaaaacattacaggaacattcttgca 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tactaagtacagctacatcattaattgaactgttgaaaacattacaggaacattcttgca 418
Query: 124 atcgttctatattggttattttaagagatacagcaaaatcattcttatcaaaaccatgga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atcgttctatattggttattttaagagatacagcaaaatcattcttatcaaaaccatgga 478
Query: 184 agactgcagagggcgcagacgaaaaaggagttcaattaaatcaaagtatagacatatttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agactgcagagggcgcagacgaaaaaggagttcaattaaatcaaagtatagacatatttg 538
Query: 244 gtaaagttttcttcgagaacattgaaattgatgacattaaagattgcactttgtcaataa 303
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 539 gtaaagttttcttcgagaacattgaaattgatgatattaaagattgcactttgtcaataa 598
Query: 304 tgaatgacgtagaggctcttaaaaaagggcgttctcatctcaattcttataaaagcatta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgaatgacgtagaggctcttaaaaaagggcgttctcatctcaattcttataaaagcatta 658
Query: 364 ataaaaacaatttctcgatattattccggatcataggaagttctttgcatgatagaacta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ataaaaacaatttctcgatattattccggatcataggaagttctttgcatgatagaacta 718
Query: 424 agcagaaagtaaacgaaaatctaactaactcagaacatttggaagtgtgggaaagtgtg 482
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 719 agcagaaagtaaacgaaaatctaacaaactcagaacatttggaagtgtgggaaagtgtg 777
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 210,572
Number of extensions: 4447
Number of successful extensions: 4447
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4447
Number of HSP's successfully gapped: 1
Length of query: 1439
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1422
Effective length of database: 8,119,229
Effective search space: 11545543638
Effective search space used: 11545543638
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)