BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11429 (UTR included)
(1897 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2H10 1550 0.0
>BF01041A2H10
Length = 799
Score = 1550 bits (782), Expect = 0.0
Identities = 788/790 (99%)
Strand = Plus / Plus
Query: 449 tgcagaaaagaaaaaccatcaacatattttccttacagttacagaattaaatatgcagaa 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgcagaaaagaaaaaccatcaacatattttccttacagttacagaattaaatatgcagaa 69
Query: 509 atatgaaaaacttgaaaaaattggtgaagggacatatggtacagtctttaaagctaaaaa 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atatgaaaaacttgaaaaaattggtgaagggacatatggtacagtctttaaagctaaaaa 129
Query: 569 tagagaaactcatgaaatagtcgcacttaagcgagttagactggatgatgacgatgaagg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tagagaaactcatgaaatagtcgcacttaagcgagttagactggatgatgacgatgaagg 189
Query: 629 agttccatcatcagcattacgtgaaatatgcctacttaaagaattaaagcataaaaacat 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agttccatcatcagcattacgtgaaatatgcctacttaaagaattaaagcataaaaacat 249
Query: 689 tgttcgtctgtatgatgtgctacatagtgaaaaaaagttaactctagtattcgaacattg 748
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 250 tgttcgtctgtatgatgtgctacatagtgaaaaaaaattaactctagtattcgaacattg 309
Query: 749 cgaccaggatttaaaaaaatatttcgacagtctaaacgacgaaatagatttagacgtagt 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cgaccaggatttaaaaaaatatttcgacagtctaaacgacgaaatagatttagacgtagt 369
Query: 809 caaatcttttatgtatcaacttctacggggacttgctttttgccacagtcataatgtgct 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caaatcttttatgtatcaacttctacggggacttgctttttgccacagtcataatgtgct 429
Query: 869 tcatcgtgacttgaaacctcaaaatttattgataaacaaaaatggagaattgaaattagc 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tcatcgtgacttgaaacctcaaaatttattgataaacaaaaatggagaattgaaattagc 489
Query: 929 agactttggtctagccagagcttttggtattcctgtaaagtgttactctgctgaagtagt 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 agactttggtctagccagagcttttggtattcctgtaaagtgttactctgctgaagtagt 549
Query: 989 tactctctggtaccgaccacccgatgtattgtttggagcaaaactttatacaacaagcat 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tactctctggtaccgaccacccgatgtattgtttggagcaaaactttatacaacaagcat 609
Query: 1049 tgatatgtggtcggcaggttgtatttttgcagaattagctaattctgggagaccactttt 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tgatatgtggtcggcaggttgtatttttgcagaattagctaattctgggagaccactttt 669
Query: 1109 ccctggttctgatgttgatgatcaactgaagaggatttttaaattacttggaactccaaa 1168
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 670 ccctggttctgatgttgatgatcaactgaagaggatttttaaattacttggaacaccaaa 729
Query: 1169 tgaagatacttggcctggcgttactcaattgcctgactacaaacccctgccagtgtacca 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tgaagatacttggcctggcgttactcaattgcctgactacaaacccctgccagtgtacca 789
Query: 1229 acctagtcta 1238
||||||||||
Sbjct: 790 acctagtcta 799
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,345
Number of extensions: 6551
Number of successful extensions: 6551
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6550
Number of HSP's successfully gapped: 1
Length of query: 1897
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1880
Effective length of database: 8,119,229
Effective search space: 15264150520
Effective search space used: 15264150520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)