BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11434 (UTR included)
(2452 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1C06 1340 0.0
BF14_973_C2 307 4e-83
BF14_973_C1 307 4e-83
>BF01025B1C06
Length = 728
Score = 1340 bits (676), Expect = 0.0
Identities = 715/728 (98%)
Strand = Plus / Plus
Query: 1424 aaaggaggctttgcgtataaagcctgttattcttggaaatggacgctgcatacaatcaga 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaggaggctttgcgtataaagcctgttattcttggaaatggacgctgcatacaatcaga 60
Query: 1484 tgctgttatagctggatatgaagttccaaaagggtcccatatagtcttcccccactacgt 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctgttatagctggatatgaagttccaaaagggtcccatatagtcttcccccactacgt 120
Query: 1544 catgtcgaatgaggaacgatattttccgtcaccaaacgaatatattcccgagcgttggtt 1603
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgtcgaatgaggagcgatattttccgtcaccaaacgaatatattcccgagcgttggtt 180
Query: 1604 acgagatgacaccaataaggcaggaacagttataccaaatatttccaatgagaaacacat 1663
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 acgagatgacaccaataagacaggaacagttatacaaaatatttccaatgagaaacacat 240
Query: 1664 agaggcagctagatcggtctgtgaacacgctggagtcgcatctgtggtgaagaaacaaag 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaggcagctagatcggtctgtgaacacgctggagtcgcatctgtggtgaagaaacaaag 300
Query: 1724 ggatattgggatacacccgtttgcttcattaccattcggttttggaagacgtatgtgtat 1783
|||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 301 ggatatggggatacacccgtttgcttcgttaccattcggtttcggaagacgtatgtgtat 360
Query: 1784 cgggaagaggttcgctgaagccgaactacagcttctaatcgccagggcgttccagaagta 1843
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgggaagaggttcgctgaggccgaactacagcttctaatcgccagggcgttccagaagta 420
Query: 1844 taatgtgtcctggtatcatggtgaactgacttacagtgtcacccccacgtatataccgaa 1903
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 421 taatgtgtcctggtatcatggtgaactgacttacagtgtcacccccacatacataccgaa 480
Query: 1904 cgaaccgctgcgattcagattggattccaggacaaagaaattaacatagaaaattttgta 1963
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 481 cgaaccgctgcgattcagattggattccaggacaaagaaatttacatagaaaattttgta 540
Query: 1964 ttccacttgtattttagttaaaatagattaagattttatgtcctaagaccgtaaacaaca 2023
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 ttccacttgtattttagttaaaatagattaagattttatgccctaagaccgtaaacaaca 600
Query: 2024 taatatatgacagacgtataaatattttaatttcgtagaactgaaattcaataatttatc 2083
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 601 taatatatgacagacgtataaatattttaatttcgtagaacagaaattcaataatttatc 660
Query: 2084 aaatcatatacagactcattagtctagactgatagttatagatatagaacattctgtcac 2143
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 661 aaatcatatacagactcattagtctagactgaaagttatagatatagaacattctgtcac 720
Query: 2144 catataca 2151
||||||||
Sbjct: 721 catataca 728
>BF14_973_C2
Length = 782
Score = 307 bits (155), Expect = 4e-83
Identities = 161/163 (98%)
Strand = Plus / Minus
Query: 2199 tatttagccgagtcgttgagctggtactcgttggagcgaccgaagcactcctggacgcca 2258
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 691 tatttagccgagtcgttgagctggtactcgttggagcggccgaagcactcctggacgcca 632
Query: 2259 gcatcagcccacagcctcttcatagctgctagcaactcttcactgaacggctcagtgtct 2318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gcatcagcccacagcctcttcatagctgctagcaactcttcactgaacggctcagtgtct 572
Query: 2319 tccatccgctggatcacgtcgaacaccatcttaccgtcactct 2361
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 571 tccatccgctggatcacgtcgaacaccatcttaccgtcgctct 529
>BF14_973_C1
Length = 1097
Score = 307 bits (155), Expect = 4e-83
Identities = 161/163 (98%)
Strand = Plus / Minus
Query: 2199 tatttagccgagtcgttgagctggtactcgttggagcgaccgaagcactcctggacgcca 2258
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 827 tatttagccgagtcgttgagctggtactcgttggagcggccgaagcactcctggacgcca 768
Query: 2259 gcatcagcccacagcctcttcatagctgctagcaactcttcactgaacggctcagtgtct 2318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gcatcagcccacagcctcttcatagctgctagcaactcttcactgaacggctcagtgtct 708
Query: 2319 tccatccgctggatcacgtcgaacaccatcttaccgtcactct 2361
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 707 tccatccgctggatcacgtcgaacaccatcttaccgtcgctct 665
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,373
Number of extensions: 4932
Number of successful extensions: 4932
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4932
Number of HSP's successfully gapped: 3
Length of query: 2452
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2435
Effective length of database: 8,119,229
Effective search space: 19770322615
Effective search space used: 19770322615
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)