BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11435 (UTR included)
(2785 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B2F07 531 e-150
BF14_1695_C1 94 1e-18
BF14_1645_C1 76 3e-13
BF01025B1E11 74 1e-12
>BF01010B2F07
Length = 296
Score = 531 bits (268), Expect = e-150
Identities = 289/296 (97%)
Strand = Plus / Plus
Query: 1465 ctccaatgatgaaactccttggtttcaagccagccagtatcatttgtaaggaaaagtggt 1524
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctccaatgatgaaactccttggcttcaagccagccagtatcatttgtaaggaaaagtggt 60
Query: 1525 attttaaaattggacaatttttatatccaaatgaaagtattatagaaggttccacagtcg 1584
|||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attttaaaatcggtcaattcttatatccaaatgaaagtattatagaaggttccacagtcg 120
Query: 1585 ctttcaaagctttacatgaagcttgcactgttatgaaaatggtagcactttgtattttgt 1644
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 ctttcaaagctttacatgaagcttgcactgttatgaaaatggtagcaccttgtattttgt 180
Query: 1645 gtactagagtcaattctagacccgtaatagttgcgctgagtccttgtgtgaaacctctca 1704
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 181 gtactagagtcaattctagacctgtaatagttgcgctgagtccttgtgtgaagcctctca 240
Query: 1705 atcttaacattgatattggttttgacattgttaatataccatttgttgaacatgta 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcttaacattgatattggttttgacattgttaatataccatttgttgaacatgta 296
>BF14_1695_C1
Length = 1407
Score = 93.7 bits (47), Expect = 1e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 364 actggcagaatatactgtgcacgtctttactcggatgaaggccatattataaaaaaaaa 422
|||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||
Sbjct: 1191 actggcagaatatactgtgcacgtctttgcacggatgaatgccatattataaaaaaaaa 1249
>BF14_1645_C1
Length = 793
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 359 acgatactggcagaatatactgtgcacgtctttactcggatgaaggccatattataaaaa 418
|||| ||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||
Sbjct: 129 acgacactggcagaatatactgtgcacgtcttggcacgggtgaaggccataatataaaaa 188
Query: 419 aa 420
||
Sbjct: 189 aa 190
>BF01025B1E11
Length = 786
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 359 acgatactggcagaatatactgtgcacgtctttactcggatgaaggccatatt 411
||||||||||||||||||| |||||||||| || | |||||||||||||||||
Sbjct: 215 acgatactggcagaatatattgtgcacgtccttgcacggatgaaggccatatt 267
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 475,795
Number of extensions: 11459
Number of successful extensions: 11459
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 11459
Number of HSP's successfully gapped: 4
Length of query: 2785
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2768
Effective length of database: 8,119,229
Effective search space: 22474025872
Effective search space used: 22474025872
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)