BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11465 (UTR included)
(1342 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2435_C1 892 0.0
>BF14_2435_C1
Length = 722
Score = 892 bits (450), Expect = 0.0
Identities = 476/482 (98%), Gaps = 2/482 (0%)
Strand = Plus / Plus
Query: 358 caactatcctaaaatttaagacaaaaaactacgcaaattccatgcatcggtgttctctta 417
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 1 caactatcctaaaatttaagacaaaaaactacgcaaattccatgcatcgctgttttctta 60
Query: 418 tttaataaaatcagttcatcttccatagtctaatcgaataaactcgaagtattgttaaaa 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttaataaaatcagttcatcttccatagtctaatcgaataaactcgaagtattgttaaat 120
Query: 478 aattcataactttatattacgaaatgtcagcattttcaattttaatattattgactgtgt 537
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 a-ttcataactttatattacgaaatgtcagcattttcaattttaatattattgactgtgt 179
Query: 538 gcagtgtttgttatgctaaccccgatgctaagaggctgtatgacgatttgttaagtaatt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gcagtgtttgttatgctaaccccgatgctaagaggctgtatgacgatttgttaagtaatt 239
Query: 598 acaatagacttatcagaccggtcgataaaaataacaatacagtgctggtaaaacttggtc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acaatagacttatcagaccggtcgataaaaataacaatacagtgctggtaaaacttggtc 299
Query: 658 tcaggctttctcagctcattgacctgaatttgaaa-gatcaaattctgacaaccaacgtc 716
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 300 tccggctttctcagctcattgacctgaatttgaaaggatcaaattctgacaaccaacgtc 359
Query: 717 tggctggaacatgaatgggaagaccacaaatttaaatgggaccctctggagtacggtggg 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggctggaacatgaatgggaagaccacaaatttaaatgggaccctctggagtacggtggg 419
Query: 777 gttaaggaactttatgttccttcagagcacatttggcttccagatatcgttttatataac 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gttaaggaactttatgttccttcagagcacatttggcttccagatatcgttttatataac 479
Query: 837 aa 838
||
Sbjct: 480 aa 481
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,318
Number of extensions: 6381
Number of successful extensions: 6381
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6379
Number of HSP's successfully gapped: 1
Length of query: 1342
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1325
Effective length of database: 8,119,229
Effective search space: 10757978425
Effective search space used: 10757978425
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)