BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11493 (UTR included)
(1822 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2503_C1 2076 0.0
>BF14_2503_C1
Length = 1340
Score = 2076 bits (1047), Expect = 0.0
Identities = 1065/1071 (99%)
Strand = Plus / Plus
Query: 752 atacgtctctagatcggacccacgaggagccctccctgcgtggcttgttaacagagtaac 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atacgtctctagatcggacccacgaggagccctccctgcgtggcttgttaacagagtaac 60
Query: 812 ggctcagttggcacctcgtctcgtgcatcagctccacgcagcctcccgccggtaccctgg 871
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggctcagctggcacctcgtctcgtgcatcagctccacgcagcctcccgccggtaccctgg 120
Query: 872 gtggaaggcgctgaccgacaccccctattaccaaccctggaggaatccagaacaagtgcc 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtggaaggcgctgaccgacaccccctattaccaaccctggaggaatccagaacaagtgcc 180
Query: 932 accttaccgcatcaatttagaggattgcattgaccccgaagctcccccacctccggtgga 991
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accttaccgcatcaacttagaggattgcattgaccccgaagctcccccacctccggtgga 240
Query: 992 acagaagcccaatacttcgaaaacaaaacttgaagtaccgcaagttaaagaagtagaaag 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagaagcccaatacttcgaaaacaaaacttgaagtaccgcaagttaaagaagtagaaag 300
Query: 1052 tcatagtatcgaagatttgggagacatatcatcagaattcagtgtggaagtagaagaact 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcatagtatcgaagatttgggagacatatcatcagaattcagtgtggaagtagaagaact 360
Query: 1112 agcagatctcactctcgatccgactaagaagaaagggaagttctataaattggtgaaatc 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcagatctcactctcgatccgactaagaagaaagggaagttctataaattggtgaaatc 420
Query: 1172 catgaagaatagaaggaagagtgttcaagttgcaaagagtgcggacaatttagtagatgc 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catgaagaatagaaggaagagtgttcaagttgcaaagagtgcggacaatttagtagatgc 480
Query: 1232 caaacctacagaagtcgaaaaaacagaaaagaggaagtcgtctttcaaatttcaccgaag 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaacctacagaagtcgaaaaaacagaaaagaggaagtcgtctttcaaatttcaccgaag 540
Query: 1292 gtttagtcttagtaggggacgggaggactgaagaataattcagtttaaactatatcttct 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtttagtcttagtaggggacgggaggactgaagaataattcagtttaaactatatcttct 600
Query: 1352 aaatcaataacaattgttgtagtggaatgtttccatcgaataatttagaagcctcgttgt 1411
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 601 aaatcaataacaattgttgtagtggaatgtttccatcaaataatttagaagcctcgttgt 660
Query: 1412 tactttgaaattctcttggatttataacgtattctccttaaatcttcgttgttaactcgc 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tactttgaaattctcttggatttataacgtattctccttaaatcttcgttgttaactcgc 720
Query: 1472 taaatgtagtctgactatggcaatatcatgacgtcggaaattcaaagtctgcgtgaagaa 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taaatgtagtctgactatggcaatatcatgacgtcggaaattcaaagtctgcgtgaagaa 780
Query: 1532 acgttaaaacaaaaatcatttactaattatatacagactctttagataagtaagaaaatg 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 acgttaaaacaaaaatcatttactaattatatacagactctttagataagtaagaaaatg 840
Query: 1592 agatataatgagataagtgaaattgttggttacgtaggaatgatgtaggttaagatgtta 1651
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agatataatgagataagtgaaattgttggttacgtaggaatgatgtaggttaagatgttg 900
Query: 1652 aagtagaatgattattaaacattataaatgatcttcttctgtctgtctgttcgaaggtta 1711
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aagtagaatgattattaaatattataaatgatcttcttctgtctgtctgttcgaaggtta 960
Query: 1712 tttcatataaagagagtgtgtgctatagtgcaatcaaaacagtaacattaattgaaaaga 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 tttcatataaagagagtgtgtgctatagtgcaatcaaaacagtaacattaattgaaaaga 1020
Query: 1772 atgaataatatattgttgcacaaatatcgatgtcgcatatcagctgttcac 1822
||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atgaataatatatcgttgcacaaatatcgatgtcgcatatcagctgttcac 1071
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,924
Number of extensions: 4734
Number of successful extensions: 4734
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4734
Number of HSP's successfully gapped: 1
Length of query: 1822
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1805
Effective length of database: 8,119,229
Effective search space: 14655208345
Effective search space used: 14655208345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)