BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11496 (UTR included)
(1978 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 200 6e-51
BF14_335_C2 188 2e-47
BF01043B1E03 127 7e-29
BF01060B1D11 101 4e-21
BF01031B2E06 100 2e-20
BF01055B2A04 92 4e-18
BF01056B1D01 76 2e-13
BF01017A1F03 74 9e-13
BF01037A2H12 68 6e-11
>BF01047B2H03
Length = 758
Score = 200 bits (101), Expect = 6e-51
Identities = 302/365 (82%), Gaps = 3/365 (0%)
Strand = Plus / Minus
Query: 672 acttgctatatctgtgggaaggcagttggaactgctaggcacttgttagtgggatgtaag 731
|||||||||||||| | | |||||||||||| |||| ||| ||| | ||||||||| |
Sbjct: 364 acttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtagg 305
Query: 732 gtactcctcgatagcggtcaatactcgcg-tcgtcacgatagggttctagaaatcatacg 790
||||||| |||||||||||||||| || || || ||||||||| || | ||||||
Sbjct: 304 ctactcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcataca 245
Query: 791 tgaagcggttagtctttcggtagccagagcgcaaaaaggaataaccacaaacgagcgatc 850
||||||||||||| ||| ||||| || ||| |||||| |||||||||||||| |||||
Sbjct: 244 tgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgatt 185
Query: 851 agtaggttttgtgagagagggcactagggctataaaaacaaatgttaagccttactccat 910
| | |||||||||||||| | || |||||||||||| |||| | ||||||||||| ||
Sbjct: 184 aattggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactctat 125
Query: 911 ccttaaagcggctacggattggactataatgatggatacgtgtgaaaaacaatacaaaat 970
||||||||||| | ||||||| |||||||| |||||||||| || ||| |||||||||
Sbjct: 124 ccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgatacaaaat 65
Query: 971 ccccgaggatatttgtgcgtcggcctccagaccggacata-ttcatgtattcgcgaatct 1029
||||||| ||| ||||| ||||| |||||||| |||||| || || ||||||||||| |
Sbjct: 64 ccccgagcata-ttgtgtgtcggtttccagaccagacatattttatatattcgcgaattt 6
Query: 1030 taaag 1034
|||||
Sbjct: 5 taaag 1
Score = 101 bits (51), Expect = 4e-21
Identities = 87/97 (89%), Gaps = 4/97 (4%)
Strand = Plus / Minus
Query: 473 atataagatccatgcaataagtttagaaatgcagaacgagtggttagacatag-gagatt 531
|||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||
Sbjct: 502 atataacatccatgcaatgagtttagatatgcagaacgagtggttagacatagagaga-- 445
Query: 532 tttgcatcccattagcactaaaatggcgcaccttaat 568
|| ||| ||||||||| |||||||||||||||||||
Sbjct: 444 -ttccattccattagcaataaaatggcgcaccttaat 409
>BF14_335_C2
Length = 1827
Score = 188 bits (95), Expect = 2e-47
Identities = 276/337 (81%), Gaps = 22/337 (6%)
Strand = Plus / Minus
Query: 1006 acatattcatgtattcgcgaatcttaaagcgcgttgtgatgatagagcttacggttcctt 1065
||||||| ||||||||||||| |||||||||| | | | ||||||| |||||||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 1066 gggaaaccaacatccccaaagaccataccatcaaggtcaacaaatattacgagctcacaa 1125
|| | ||||||||||||||| ||||| |||||||||||||||| ||||| |||||||| |
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
Query: 1126 acgaactcactcgaaataggttcgtcgtgga-tttatacgcggtagaagtgggagc---- 1180
| ||||||||||| | | ||| |||| ||||||||||||||
Sbjct: 1157 ------------ggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagt 1110
Query: 1181 --gagaggtataacggctaaatctctctacaacctactaaaagacttaggcctgtccaga 1238
|||||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||
Sbjct: 1109 gagagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccaga 1050
Query: 1239 actcacatcaattcgttcttggaacgtacttcgaaggcagccctagtaggttcttttcaa 1298
||| ||| || ||| ||||| ||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 1049 actaacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaa 990
Query: 1299 atatggttaggtagggagaggagcttggacagtggag 1335
|| ||||||| | ||||||||||||||| ||||||
Sbjct: 989 atttggttag---gagagaggagcttggacggtggag 956
>BF01043B1E03
Length = 830
Score = 127 bits (64), Expect = 7e-29
Identities = 138/162 (85%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 1174 tgggagcgagaggtataacggctaaatctctctacaacctactaaaagacttaggcctgt 1233
|||||| | |||||||||| ||| |||||||||||||||||| ||| |||| |||||
Sbjct: 204 tgggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgc 263
Query: 1234 ccagaactcacatcaattcgttcttggaacgtacttcgaaggcagccctagtaggttctt 1293
|||||||| ||||||| || ||||||||||||||| | ||||||| || |||||| |
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcc---taggtttgt 320
Query: 1294 ttcaaatatggttaggtagggagaggagcttggacagtggag 1335
||||||| ||||||||||| ||||||| ||||||||||||||
Sbjct: 321 ttcaaatttggttaggtagagagaggaccttggacagtggag 362
>BF01060B1D11
Length = 799
Score = 101 bits (51), Expect = 4e-21
Identities = 87/97 (89%), Gaps = 4/97 (4%)
Strand = Plus / Minus
Query: 473 atataagatccatgcaataagtttagaaatgcagaacgagtggttagacatag-gagatt 531
|||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct: 330 atataagatccatgcaatgcgtttagagatgcagaacgagtggttagacatagagaga-- 273
Query: 532 tttgcatcccattagcactaaaatggcgcaccttaat 568
|| ||| ||||||||| |||||||||||||||||||
Sbjct: 272 -ttccattccattagcaataaaatggcgcaccttaat 237
Score = 87.7 bits (44), Expect = 6e-17
Identities = 93/109 (85%), Gaps = 4/109 (3%)
Strand = Plus / Minus
Query: 625 tcccagatcagagtaatttagtaaga----tggggtaaaggtaccgaaaagacttgctat 680
|||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 681 atctgtgggaaggcagttggaactgctaggcacttgttagtgggatgta 729
|| || | |||||||||||||| ||||| ||| ||| | |||||||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgta 126
>BF01031B2E06
Length = 707
Score = 99.6 bits (50), Expect = 2e-20
Identities = 170/212 (80%), Gaps = 11/212 (5%)
Strand = Plus / Plus
Query: 1068 gaaaccaacatccccaaagaccataccatcaaggtcaacaaatattacgagctcacaaac 1127
|||||||||||||||||||||||| |||||||| |||| || ||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacga---------- 485
Query: 1128 gaactcactcgaaataggttcgtcgtggatttatacgcggtagaagtgggagcgagaggt 1187
| |||||| ||||||||||| | |||| ||||||||||||||||||||||| | |
Sbjct: 486 -agctcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgtt 544
Query: 1188 ataacggctaaatctctctacaacctactaaaagacttaggcctgtccagaactcacatc 1247
||| |||||||||||| |||||||||||||| ||| |||||||||||| || |||||
Sbjct: 545 gtaaaagctaaatctctccacaacctactaaaaaccttgggcctgtccagatctaacatc 604
Query: 1248 aattcgttcttggaacgtacttcgaaggcagc 1279
|| | | || |||| |||||||||||||||
Sbjct: 605 aaataatctttagaacatacttcgaaggcagc 636
>BF01055B2A04
Length = 830
Score = 91.7 bits (46), Expect = 4e-18
Identities = 185/229 (80%), Gaps = 13/229 (5%)
Strand = Plus / Minus
Query: 1047 atagagcttacggttccttgggaaaccaacatccccaaagaccataccatcaaggtcaac 1106
|||||||||||| |||| ||| ||||||||||||||||||||| | ||| | |||||||
Sbjct: 541 atagagcttacgattccctggaaaaccaacatccccaaagaccgtgccaccgaggtcaat 482
Query: 1107 aaatattacgagctcacaaacgaactcactcgaaataggttcgtcgtggatttatacgcg 1166
| | ||| ||||||| |||||||||||| | ||||| |||||||| | ||
Sbjct: 481 a---agtacaagctcactaacgaactcactaggaatagattcgtcgtaaactt------- 432
Query: 1167 gtagaagtgggagcgagaggtataacggctaaatctctctacaacctactaaaagactta 1226
||| || ||| ||||| ||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 431 gtacaattggaagcgaaaggtataacagctaaa--tctctacaacctactaaaagacttg 374
Query: 1227 ggcctgtccagaactcacatcaattcgttcttggaacgtacttcgaagg 1275
||||||| | | ||| |||||| | ||||| ||||||||||||||||
Sbjct: 373 ggcctgt-taaagatcaaatcaatccattcttagaacgtacttcgaagg 326
>BF01056B1D01
Length = 838
Score = 75.8 bits (38), Expect = 2e-13
Identities = 111/134 (82%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 523 taggagatttttgcatcccattagcactaaaatggcgcaccttaa-tccatgattggtcg 581
|||||||||||||| ||||| |||||| ||| | || ||| |||| | ||||||||| |
Sbjct: 192 taggagatttttgcgtcccaatagcacaaaagtagcccactttaaatttatgattggttg 133
Query: 582 ccagcattgctaaa-----attctatctcaatgcgttccagatgactctcccagatcaga 636
|||||| ||||||| ||| ||||| |||||||||| |||||||| ||| ||||||
Sbjct: 132 ccagcactgctaaattaaaattttatcttgatgcgttccaaatgactcttccaaatcaga 73
Query: 637 gtaatttagtaaga 650
||||||||||||||
Sbjct: 72 gtaatttagtaaga 59
>BF01017A1F03
Length = 782
Score = 73.8 bits (37), Expect = 9e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 1161 tacgcggtagaagtgggagcgagaggtataacggctaaatctctc 1205
||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 57 tacgcggtagaagcgggagcgagagatataacggctaaatctctc 101
>BF01037A2H12
Length = 773
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1156 atttatacgcggtagaagtgggagcgagaggtataacggctaaatctctctacaacctac 1215
|||| |||| |||| |||| |||||||||||||||| || ||||||||| ||||||| |
Sbjct: 672 atttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgacaacctgc 731
Query: 1216 taaaagactt 1225
||||||||||
Sbjct: 732 taaaagactt 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,040
Number of extensions: 4976
Number of successful extensions: 4976
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 4968
Number of HSP's successfully gapped: 13
Length of query: 1978
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1961
Effective length of database: 8,119,229
Effective search space: 15921808069
Effective search space used: 15921808069
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)