BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11502 (UTR included)
(1612 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A2D09 842 0.0
>BF01026A2D09
Length = 745
Score = 842 bits (425), Expect = 0.0
Identities = 490/511 (95%), Gaps = 8/511 (1%)
Strand = Plus / Plus
Query: 1110 tgaagctgaaataagacagtattggctagtcaatcaataaattatggttttaggtaccaa 1169
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgaagctgaaacaagacagtattggctagtcaatcaataaattatggttttaggtaccaa 69
Query: 1170 tgagcatttttattgaatgcagtgtgaatttgttaaatgataactaaataaaacgtgata 1229
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70 tgagcatttttattgaatgcagtgtgaatttgttaaaagataactaaataaaacgtgata 129
Query: 1230 atattatcaatattaatggacattttatacaatattatatataaaaaaaaagttgattgt 1289
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 130 atattatcaataataatggacattttatacaatattatatataaaaaaaacgttgattgt 189
Query: 1290 gaaattaaggatgtgtatcataggatacagataaaagtttatcattgaaacaatctcaca 1349
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gaaattaaagatgtgtatcataggatacagataaaagtttatcattgaaacaatctcaca 249
Query: 1350 agtcaaatgaagcagaaggtagttataattaataagataaactgcaaagcctttaattac 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agtcaaatgaagcagaaggtagttataattaataagataaactgcaaagcctttaattac 309
Query: 1410 atattatacatatattgttgatcaattaaatctctgagatatatatcttcttctttgcct 1469
|||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct: 310 atattatacatatattgttgctcaaataaatctctgagatatatataatcttctttgcct 369
Query: 1470 cttcccatgttagccggggtcggctctttgaggtata--------tatatatatatatat 1521
|||||||||||||||||| |||||||| ||||||||| |||||||||||||||
Sbjct: 370 cttcccatgttagccgggatcggctctctgaggtatatatatatatatatatatatatat 429
Query: 1522 atgattatatatgttaaaagtaaacgagtgaatctaattgacatttgtgagtacttatga 1581
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 430 atgattatatatgttaaaagtaaatgagtgaatctaattgacatttgtaagtacttatga 489
Query: 1582 ataaatttaatgagtacactatttagtgtat 1612
|||||||||||||||||||||||||||||||
Sbjct: 490 ataaatttaatgagtacactatttagtgtat 520
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 327,458
Number of extensions: 14942
Number of successful extensions: 14942
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14933
Number of HSP's successfully gapped: 1
Length of query: 1612
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1595
Effective length of database: 8,119,229
Effective search space: 12950170255
Effective search space used: 12950170255
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)