BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11507 (UTR included)
(3361 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1A03 1326 0.0
BF01056A1B12 829 0.0
BF01052A2G11 537 e-152
>BF01056A1A03
Length = 709
Score = 1326 bits (669), Expect = 0.0
Identities = 681/685 (99%)
Strand = Plus / Plus
Query: 1776 gaccaggaccctgaacttggtggtgcggtgcagttgatgggtgtattacgtattctactc 1835
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gaccaggaccctgaacttggtggtgcggtgcagttaatgggtgtattacgtattctactc 60
Query: 1836 gaccctgaaagcatgttggcctcagtcaataaaagtgagaaggtggacttcctcaatttc 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaccctgaaagcatgttggcctcagtcaataaaagtgagaaggtggacttcctcaatttc 120
Query: 1896 ttctacaaacacagtatacaaacccttatagctcccttattgcaaaatacaactggtgag 1955
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctacaaacacagtacacaaacccttatagctcccttattgcaaaatacaactggtgag 180
Query: 1956 aaaccatcgaaggaggattatcatactgtgcagcttttgggacttgtacttgaactactt 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaccatcgaaggaggattatcatactgtgcagcttttgggacttgtacttgaactactt 240
Query: 2016 tcattttgtgtcgaacatcacacataccacataaaaacttgtatattaaacaaggatctt 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcattttgtgtcgaacatcacacataccacataaaaacttgtatattaaacaaggatctt 300
Query: 2076 ttgcggcgcattttggttctcatgaggtgtacacatacattcttagtgcttggagctcta 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgcggcgcattttggttctcatgaggtgtacacatacattcttagtgcttggagctcta 360
Query: 2136 aggtttatgaggaaaattattgctcttaaagatgagtactacaacagatatataataaaa 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggtttatgaggaaaattattgctcttaaagatgagtactacaacagatatataataaaa 420
Query: 2196 ggaagtctctttgcaccggttgttgatgctttccttagaaataatggcaggtacaactta 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggaagtctctttgcaccggttgttgatgctttccttagaaataatggcaggtacaactta 480
Query: 2256 ttagattctgcgatattagagttatttgaattcattaaattagaagacattaagtcgctg 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttagattctgcgatattagagttatttgaattcattaaattagaagacattaagtcgctg 540
Query: 2316 tgttcacacgttgtggaaaactatgggaagatcttagaggatgtggagtatgtacaaacg 2375
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgttcacatgttgtggaaaactatgggaagatcttagaggatgtggagtatgtacaaacg 600
Query: 2376 tttaaggctttaaagacgcgttatgaccaacaccaggacaaacttaaggaaagggatcga 2435
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttaaggctttaaagacacgttatgaccaacaccaggacaaacttaaggaaagggatcga 660
Query: 2436 gtgagcggtagcgtggctgtcgcgg 2460
|||||||||||||||||||||||||
Sbjct: 661 gtgagcggtagcgtggctgtcgcgg 685
>BF01056A1B12
Length = 837
Score = 829 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Plus
Query: 382 gaagtgaaaatctgttattacaaatgggagataaataaaaaaagaaagcggtgcatagaa 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gaagtgaaaatctgttattacaaatgggagataaataaaaaaagaaagcggtgcatagaa 289
Query: 442 atagcgccagaataattgttaaataatttgagtaaatagtcatatttgcgttgactatca 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atagcgccagaataattgttaaataatttgagtaaatagtcatatttgcgttgactatca 349
Query: 502 tgacagacactagacgaagagtcaagctttacgctctgaatgctgaccggcaatgggatg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgacagacactagacgaagagtcaagctttacgctctgaatgctgaccggcaatgggatg 409
Query: 562 accggggaacggggcatgtttcatcatgtttcgtagagagattaaaaggtacatcattat 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 accggggaacggggcatgtttcatcatgtttcgtagagagattaaaaggtacatcattat 469
Query: 622 tagtaagggcagagtcagatggaactctgttgttggaaagcaaaatacaacctgacacag 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tagtaagggcagagtcagatggaactctgttgttggaaagcaaaatacaacctgacacag 529
Query: 682 cttatcagaaacaacaagacactttgatagtttggtcagaaggtgataactttgacttag 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cttatcagaaacaacaagacactttgatagtttggtcagaaggtgataactttgacttag 589
Query: 742 ctttaagttttcaagagaaagctggctgcgatgaaatttgggagaaaatatgtcaggt 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ctttaagttttcaagagaaagctggctgcgatgaaatttgggagaaaatatgtcaggt 647
Score = 438 bits (221), Expect = e-122
Identities = 221/221 (100%)
Strand = Plus / Plus
Query: 23 atccggtaaatattctgtttttagaaagtgtacactatgaagacgttcaaaatactgtag 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 atccggtaaatattctgtttttagaaagtgtacactatgaagacgttcaaaatactgtag 69
Query: 83 tttgtgtacataactaagtttttaaagtgtagtgaaaggcttacagattgtattgttttg 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tttgtgtacataactaagtttttaaagtgtagtgaaaggcttacagattgtattgttttg 129
Query: 143 tttgtgatttcctataatttagcgatccattgtcatacaaaaaaataattagtaattcct 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tttgtgatttcctataatttagcgatccattgtcatacaaaaaaataattagtaattcct 189
Query: 203 aattattcttcaaatacaacagtgaaatatataaagttacg 243
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aattattcttcaaatacaacagtgaaatatataaagttacg 230
>BF01052A2G11
Length = 409
Score = 537 bits (271), Expect = e-152
Identities = 274/275 (99%)
Strand = Plus / Plus
Query: 2456 cgcggaggctgtggttccgtcgctgctgcggacgagataccgccgcgaggctcgccagcc 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 cgcggaggctgtggttccgtcgctgctgcggacgagataccgccgcgaggctcgccagcc 110
Query: 2516 tgacgacgaggaggagatgtggttcaacgacgacgacgagctggaggacgacgcgcccct 2575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tgacgacgaggaggagatgtggttcaacgacgacgacgagctggaggacgacgcgcccct 170
Query: 2576 cgacgccgccgccacgcacgcgaccgcacaccacgcgctcgacgctataggcaagatagt 2635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cgacgccgccgccacgcacgcgaccgcacaccacgcgctcgacgctataggcaagatagt 230
Query: 2636 ggaaaagaaagtatgttcgagtacggagacagtgaacggtcctagcagggtgttgctcag 2695
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 231 ggaaaagaaagtatgttcgagtacagagacagtgaacggtcctagcagggtgttgctcag 290
Query: 2696 cacatctcccaagcctgtacacaccgacgttcagg 2730
|||||||||||||||||||||||||||||||||||
Sbjct: 291 cacatctcccaagcctgtacacaccgacgttcagg 325
Score = 165 bits (83), Expect = 6e-40
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 2755 agggcctggtggattacgatggtgattcagacgaggaggacgaaggcggtacgtccgctc 2814
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agggcctggtggactacgatggtgattcagacgaggaggacgaaggcggtacgtccgctc 382
Query: 2815 atactcctggcgaagagcgtgacgcca 2841
|||||||||||||||||||||||||||
Sbjct: 383 atactcctggcgaagagcgtgacgcca 409
Score = 77.8 bits (39), Expect = 1e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 2457 gcggaggctgtggttccgtcgctgctgcggacgagatac 2495
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggaggctgtggttccgtcgctgctgcggacgagatac 39
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 417,931
Number of extensions: 8077
Number of successful extensions: 8077
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8077
Number of HSP's successfully gapped: 6
Length of query: 3361
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3343
Effective length of database: 8,109,745
Effective search space: 27110877535
Effective search space used: 27110877535
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)