BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11516 (UTR included)
(2260 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1C05 1061 0.0
>BF01055B1C05
Length = 784
Score = 1061 bits (535), Expect = 0.0
Identities = 550/555 (99%)
Strand = Plus / Plus
Query: 1040 atcagtatccataagactgaagaagccggatccagagatagagagcgttaaaaattatgg 1099
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcagtgtccataagactgaagaagccggatccagagatagagagcgttaaaaattatgg 60
Query: 1100 gaaacaacttgaaactaatttaggaaattttctatacacaagatcaaaaattatagaaaa 1159
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 gaaacaacttgaaactaatttaggaaattttctttacacaagatcaaaaattatagaaaa 120
Query: 1160 aaattacgccctttgtaagctacacgctaactatggcaagctgttcagtgagtggagtgt 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaattacgccctttgtaagctacacgctaactatggcaagctgttcagtgagtggagtgt 180
Query: 1220 tatagagaaagagatgggcgatggattacaaaaggctggacattattttgattcgatagc 1279
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 tatagagaaagagatgggcgatggattacaaaaggctggacattattttgattcaatagc 240
Query: 1280 ggattccatagactcagtggcggaagacgaagagcaattagcagatcagcttaaagagta 1339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggattccatagactcagtggcggaagacgaagagcaattagcagatcagcttaaagagta 300
Query: 1340 tttgttctatgctgcagcgctgcagcaactgtgcgctaaccatgaagcgctgcagcgggc 1399
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttgttctacgctgcagcgctgcagcaactgtgcgctaaccatgaagcgctgcagcgggc 360
Query: 1400 gctggaaaacgcacaggacgctctcaataacaggatatctgagcgtggtcgtgcggctgc 1459
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctggaaaacgcccaggacgctctcaataacaggatatctgagcgtggtcgtgcggctgc 420
Query: 1460 cggcaagtctggcatcatgtctcgcttgttcggtaccaccgaacccgacatagtacgcga 1519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggcaagtctggcatcatgtctcgcttgttcggtaccaccgaacccgacatagtacgcga 480
Query: 1520 ccacgccacgagagccctcgaccacaagatacacacagacagagacaatatcgacagagc 1579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccacgccacgagagccctcgaccacaagatacacacagacagagacaatatcgacagagc 540
Query: 1580 caagagagatcttga 1594
|||||||||||||||
Sbjct: 541 caagagagatcttga 555
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 376,742
Number of extensions: 22414
Number of successful extensions: 22414
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22414
Number of HSP's successfully gapped: 1
Length of query: 2260
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2243
Effective length of database: 8,119,229
Effective search space: 18211430647
Effective search space used: 18211430647
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)