BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11520 (UTR included)
(2311 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B2H10 1463 0.0
BF01055B2B06 618 e-177
>BF01049B2H10
Length = 754
Score = 1463 bits (738), Expect = 0.0
Identities = 750/754 (99%)
Strand = Plus / Plus
Query: 1030 ccaaggtgtacccaatggatcctcccaacgacacagacccagataagaccatcgacaggg 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaaggtgtacccaatggatcctcccaacgacacagacccagataagaccatcgacaggg 60
Query: 1090 tcaaacagaatgatcagacgttcctcgatctcaattggaataatattaagaatataagtg 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaaacagaatgatcagacgttcctcgatctcaattggaataatattaagaatataagtg 120
Query: 1150 acgagaaattcgaaaaactatttgagagtctcaaaactaatacgcatttggaggtattgt 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 acgagaaattcgaaaaactatttgagagtctcaaaactaatacgcatttggaggtgttgt 180
Query: 1210 cactagtgaatgtcggcctcaacgaccgtaccgcccaactgttggccgatgctttggaag 1269
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgctagtgaatgtcggcctcaacgaccgtaccgcccaactgttggccgatgctttggaag 240
Query: 1270 tcaacagtacgctgcgtgtggttaacgtggagacgaactttataagcccggcgggagtgg 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaacagtacgctgcgtgtggttaacgtggagacgaactttataagcccggcgggagtgg 300
Query: 1330 ttcagctggtgaaggctctgctcactaccaccagcgttgaagagttccgcgcttcgaacc 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcagctggtgaaggctctgctcactaccaccagcgttgaagagttccgcgcttcgaacc 360
Query: 1390 agcggtcgcaagtcctgggcaacaagacggagatggagatcacgcggctggtggagcaga 1449
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcggtcgcaagtcctgggcaataagacggagatggagatcacgcggctggtggagcaga 420
Query: 1450 atcccacgctgctgcggcttgggttgcatctcgagtacagcgacgctcgccaccgggtcg 1509
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcccacgctgctacggcttgggttgcatctcgagtacagcgacgctcgccaccgggtcg 480
Query: 1510 cttctcacctgcagaggaacatcgacagaaattgccgattacaaaagcgggctagcgtat 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttctcacctgcagaggaacatcgacagaaattgccgattacaaaagcgggctagcgtat 540
Query: 1570 cgctaagcttgcgcttgccgcgcgggcgtccgccgccggtcggagtcgactctagcttct 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgctaagcttgcgcttgccgcgcgggcgtccgccgccggtcggagtcgactctagcttct 600
Query: 1630 tcaacctaacgccccctagcgctgagactccaacgccgacgagcgagcgaagaattaacg 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaacctaacgccccctagcgctgagactccaacgccgacgagcgagcgaagaattaacg 660
Query: 1690 ataaacctataatggaaacagataatgagaacggtttccctaatgcgaggacgccagata 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ataaacctataatggaaacagataatgagaacggtttccctaatgcgaggacgccagata 720
Query: 1750 tagaccccgctacccactttacgccaacaacgcc 1783
||||||||||||||||||||||||||||||||||
Sbjct: 721 tagaccccgctacccactttacgccaacaacgcc 754
>BF01055B2B06
Length = 379
Score = 618 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Plus
Query: 474 aagtcgtccagtacaaagacgacaacaatgacgacgccggccaagctttatggacgcgag 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 aagtcgtccagtacaaagacgacaacaatgacgacgccggccaagctttatggacgcgag 114
Query: 534 ctgtcggcgtacgatgaggttgacgttgatgagttgctgtccaagttatcacaagaggaa 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ctgtcggcgtacgatgaggttgacgttgatgagttgctgtccaagttatcacaagaggaa 174
Query: 594 ctcaccatgttggctaaagaagttgatccagatgacaactttctccctccctcgcagcgg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ctcaccatgttggctaaagaagttgatccagatgacaactttctccctccctcgcagcgg 234
Query: 654 aataactatgcatgcgagaaggaccccaccggccccctcaacaggaagaaattaatcgaa 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aataactatgcatgcgagaaggaccccaccggccccctcaacaggaagaaattaatcgaa 294
Query: 714 cacataaacaagcaagccttagaaacacccgataggccggaagtcaaaccatatgtcccc 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cacataaacaagcaagccttagaaacacccgataggccggaagtcaaaccatatgtcccc 354
Query: 774 ggtgttgtaagg 785
||||||||||||
Sbjct: 355 ggtgttgtaagg 366
Score = 107 bits (54), Expect = 8e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 200 gtaaagtatcaatcgaggttcatactttaaataaatttaatagaatattaagat 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtaaagtatcaatcgaggttcatactttaaataaatttaatagaatattaagat 54
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,583
Number of extensions: 4408
Number of successful extensions: 4408
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4408
Number of HSP's successfully gapped: 3
Length of query: 2311
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2294
Effective length of database: 8,119,229
Effective search space: 18625511326
Effective search space used: 18625511326
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)