BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11542 (UTR included)
(2140 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_736_C1 125 3e-28
BF01052B2H04 96 3e-19
BF01020B1H07 90 2e-17
BF01011A1B08 90 2e-17
BF01059A2H01 80 2e-14
BF01059B2F03 72 4e-12
>BF14_736_C1
Length = 796
Score = 125 bits (63), Expect = 3e-28
Identities = 90/99 (90%)
Strand = Plus / Plus
Query: 715 agagcctagctgagatcaggtcactacagcacgaacatgggctggctcgaccaggaaagt 774
|||||||||||| | ||| || |||||||| ||||||||||||||||||||| || ||||
Sbjct: 589 agagcctagctgtggtcaagttactacagctcgaacatgggctggctcgaccggggaagt 648
Query: 775 accaccctctcacagaaaatcggtgtgaagtagtcttta 813
||||||||||||||||| ||||| |||||||||||||||
Sbjct: 649 accaccctctcacagaagatcggcgtgaagtagtcttta 687
>BF01052B2H04
Length = 668
Score = 95.6 bits (48), Expect = 3e-19
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 715 agagcctagctgagatcaggtcactacagcacgaacatgggctggctcgaccaggaaagt 774
||||||| |||| | ||| || |||||||| |||||||||||||||||| || || ||||
Sbjct: 468 agagcctggctgtggtcatgtaactacagctcgaacatgggctggctcgtccggggaagt 409
Query: 775 accaccctctcacagaaaatcggtgtgaagtagtctttaa 814
||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 408 accaccctctcacagaagctcggtttgaagtagcctttaa 369
>BF01020B1H07
Length = 733
Score = 89.7 bits (45), Expect = 2e-17
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 737 actacagcacgaacatgggctggctcgaccaggaaagtaccaccctctcacagaaaatcg 796
|||||||| | |||||||||||||||||| || |||||||| |||||||||||| ||||
Sbjct: 113 actacagctcaaacatgggctggctcgacggggcaagtaccatcctctcacagaagatcg 54
Query: 797 gtgtgaagtagtctttaacgactgtgttt 825
| ||||||||||| |||| ||||| ||||
Sbjct: 53 gcgtgaagtagtcattaatgactgcgttt 25
>BF01011A1B08
Length = 853
Score = 89.7 bits (45), Expect = 2e-17
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 737 actacagcacgaacatgggctggctcgaccaggaaagtaccaccctctcacagaaaatcg 796
|||||||| | |||||||||||||||||| || |||||||| |||||||||||| ||||
Sbjct: 151 actacagctcaaacatgggctggctcgacggggcaagtaccatcctctcacagaagatcg 92
Query: 797 gtgtgaagtagtctttaacgactgtgttt 825
| ||||||||||| |||| ||||| ||||
Sbjct: 91 gcgtgaagtagtcattaatgactgcgttt 63
>BF01059A2H01
Length = 865
Score = 79.8 bits (40), Expect = 2e-14
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 715 agagcctagctgagatcaggtcactacagcacgaacatgggctggctcgaccaggaaagt 774
|||||||||||| | ||| || |||||||| | |||||| ||||||| |||| | ||||
Sbjct: 345 agagcctagctgtggtcacgtaactacagctccaacatgagctggcttgaccgtggaagt 286
Query: 775 accaccctctcacagaaaatcggtgtgaagtagtctttaa 814
||||||||||||||||| ||||| || ||||||||||||
Sbjct: 285 accaccctctcacagaagatcggcatggagtagtctttaa 246
>BF01059B2F03
Length = 703
Score = 71.9 bits (36), Expect = 4e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 715 agagcctagctgagatcaggtcactacagcacgaacatgggctggctcgaccaggaaagt 774
|||||||||||| ||| || ||||||| ||||||||||||||||||| | || ||
Sbjct: 124 agagcctagctgtagtcatgtaactacagatcgaacatgggctggctcgagcggggaatg 65
Query: 775 accaccctctcacagaaaatcggtgtgaagtagtctttaa 814
||||||| ||||||||| ||||| ||||||||| ||||||
Sbjct: 64 accaccccctcacagaagatcggcgtgaagtagcctttaa 25
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 228,447
Number of extensions: 4197
Number of successful extensions: 4197
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 4197
Number of HSP's successfully gapped: 6
Length of query: 2140
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2123
Effective length of database: 8,119,229
Effective search space: 17237123167
Effective search space used: 17237123167
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)