BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11571 (UTR included)
(1234 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A2C05 1096 0.0
>BF01053A2C05
Length = 664
Score = 1096 bits (553), Expect = 0.0
Identities = 563/567 (99%)
Strand = Plus / Plus
Query: 497 aaagatggcacgggggcaccagaaaatacaatcacaggccaaagccgctgagaaacagtc 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 aaagatggcacgggggcaccagaaaatacaatcacaggccaaagccgctgagaaacagtc 157
Query: 557 taagttaaaaaaacaacaagggcacagtgcaacagagcaaaagaaagctgcacagaaagc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 taagttaaaaaaacaacaagggcacagtgcaacagagcaaaagaaagctgcacagaaagc 217
Query: 617 tcttgtgcatgtttgcattatttgcaaggctcaaatgccggacccaaaaacttacaagca 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tcttgtgcatgtttgcattatttgcaaggctcaaatgccggacccaaaaacttacaagca 277
Query: 677 acactttgaaaacaaacatcccaaaaatgatctaccggaagatttgaaatctgtctaaaa 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 acactttgaaaacaaacatcccaaaaatgatctaccggaagatttgaaatctgtctaaaa 337
Query: 737 gatacaaaccattcatcaacatgacaccgacctcgtggaggagaatagaactcctagttc 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gatacaaaccattcatcaacatgacaccgacctcgtggaggagaatagaactcctagttc 397
Query: 797 aggcaaggaactatgactgtgagagccgggcccgtccgggaccaatagccagcttacgaa 856
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 398 agacaaggaactatgactgtgagagccgggcccgtccgggaccaagagccagcttacgaa 457
Query: 857 aggtggaaattatgtttcaatagtcattccattgatttatatttgtttggaaagcggtcg 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aggtggaaattatgtttcaatagtcattccattgatttatatttgtttggaaagcggtcg 517
Query: 917 gcgacgtcggcgtcatgacggtgaatggtgaacatcttctcttcttagatttaatacttt 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gcgacgtcggcgtcatgacggtgaatggtgaacatcttctcttcttagatttaatacttt 577
Query: 977 atttataagaatagtaaatactgtctatgtcaacggacattcgcatttgtcactttctct 1036
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 578 atttataagaatagtaaatactgtctatgtcnncggacattcgcatttgtcactttctct 637
Query: 1037 cgcgtgcacggtctcgtgtagtgcgtt 1063
|||||||||||||||||||||||||||
Sbjct: 638 cgcgtgcacggtctcgtgtagtgcgtt 664
Score = 184 bits (93), Expect = 2e-46
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 120 tattttgtaaagtcaaatcatagttgcctggtaaatataagtaaaagtatttttattaaa 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tattttgtaaattcaaatcatagttgcctggtaaatataagtaaaagtatttttattaaa 64
Query: 180 cgatataatcgaggttcagttcataggaattagaaag 216
|||||||||||||||||||||||||||||||||||||
Sbjct: 65 cgatataatcgaggttcagttcataggaattagaaag 101
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,631
Number of extensions: 4183
Number of successful extensions: 4183
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4183
Number of HSP's successfully gapped: 2
Length of query: 1234
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1217
Effective length of database: 8,119,229
Effective search space: 9881101693
Effective search space used: 9881101693
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)