BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11572 (UTR included)
(1582 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1H06 977 0.0
BF01053A2C05 807 0.0
>BF01059A1H06
Length = 784
Score = 977 bits (493), Expect = 0.0
Identities = 508/515 (98%)
Strand = Plus / Plus
Query: 425 agaagacaagaacgaccgcatcgaaaagaagtcgatgcgtccggtggactccggcggcgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agaagacaagaacgaccgcatcgaaaagaagtcgatgcgtccggtggactccggcggcgg 329
Query: 485 cttcctgctggaggcagaggaggacgtggcgacccccgcgccccgcgccccgcctgcgcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cttcctgctggaggcagaggaggacgtggcgacccccgcgccccgcgccccgcctgcgcc 389
Query: 545 catcgtgcaccgccccgaccagccgcgctgccttcactgcggctcgccctttccgcagtc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 catcgtgcaccgccccgaccagccgcgctgccttcactgcggctcgccctttccgcagtc 449
Query: 605 ctatctgttggacaccttcgattacaacgcctgcgacgcctgcagggacgacgaggacaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctatctgttggacaccttcgattacaacgcctgcgacgcctgcagggacgacgaggacaa 509
Query: 665 acatgagctgatcacccggacggaggccaagagcgagttcctgctgaaggactgcgacct 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 acatgagctgatcacccggacggaggccaagagcgagttcctgctgaaggactgcgacct 569
Query: 725 ggacgctcggccgccgccgctgaggtgtgtaaggcgccgaaacccgcaccgcgcgcgctt 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ggacgctcggccgccgccgctgaggtgtgtaaggcgccgaaacccgcaccgcgcgcgctt 629
Query: 785 cgccgagatgagactgtacctgcgcgtgcaggtggagcagcgcgccctcgaggtgtgggg 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cgccgagatgagactgtacctgcgcgtgcaggtggagcagcgcgccctcgaggtgtgggg 689
Query: 845 ctccgaggagcagctacggcgggaacgggaggagcgggacaggcgccgagagcgagccgc 904
||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 690 ctccgnnnancagctgcggcgggaacgggaggagcgggacaggcgccgnnagcgagccgc 749
Query: 905 cgacacagccgcccgccgccgtctccgggcgctgc 939
|||||||||||||||||||||||||||||||||||
Sbjct: 750 cgacacagccgcccgccgccgtctccgggcgctgc 784
>BF01053A2C05
Length = 664
Score = 807 bits (407), Expect = 0.0
Identities = 417/421 (99%)
Strand = Plus / Minus
Query: 1149 aacgcactacacgagaccgtgcacgcgagagaaagtgacaaatgcgaatgtccgttgaca 1208
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 664 aacgcactacacgagaccgtgcacgcgagagaaagtgacaaatgcgaatgtccgnngaca 605
Query: 1209 tagacagtatttactattcttataaataaagtattaaatctaagaagagaagatgttcac 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tagacagtatttactattcttataaataaagtattaaatctaagaagagaagatgttcac 545
Query: 1269 cattcaccgtcatgacgccgacgtcgccgaccgctttccaaacaaatataaatcaatgga 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cattcaccgtcatgacgccgacgtcgccgaccgctttccaaacaaatataaatcaatgga 485
Query: 1329 atgactattgaaacataatttccacctttcgtaagctggctattggtcccggacgggccc 1388
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 484 atgactattgaaacataatttccacctttcgtaagctggctcttggtcccggacgggccc 425
Query: 1389 ggctctcacagtcatagttccttgcctgaactaggagttctattctcctccacgaggtcg 1448
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 424 ggctctcacagtcatagttccttgtctgaactaggagttctattctcctccacgaggtcg 365
Query: 1449 gtgtcatgttgatgaatggtttgtatcttttagacagatttcaaatcttccggtagatca 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtgtcatgttgatgaatggtttgtatcttttagacagatttcaaatcttccggtagatca 305
Query: 1509 tttttgggatgtttgttttcaaagtgttgcttgtaagtttttgggtccggcatttgagcc 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tttttgggatgtttgttttcaaagtgttgcttgtaagtttttgggtccggcatttgagcc 245
Query: 1569 t 1569
|
Sbjct: 244 t 244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 168,391
Number of extensions: 3332
Number of successful extensions: 3332
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3330
Number of HSP's successfully gapped: 2
Length of query: 1582
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1565
Effective length of database: 8,119,229
Effective search space: 12706593385
Effective search space used: 12706593385
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)