BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11575 (UTR included)
(1957 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_173_C1 2611 0.0
>BF14_173_C1
Length = 1323
Score = 2611 bits (1317), Expect = 0.0
Identities = 1321/1323 (99%)
Strand = Plus / Plus
Query: 342 tctgtcaatgaaaacaatattttatatttcacaatagtcaatacttatttacaatctatt 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgtcaatgaaaacaatattttatatttcacaatagtcaatacttatttacaatctatt 60
Query: 402 atcaccatctttgttgggatttaataatttgcaatgataattacaatttcgtgcttctaa 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcaccatctttgttgggatttaataatttgcaatgataattacaatttcgtgcttctaa 120
Query: 462 ccggtacccagtttaccgagaattcagtaaagtgcaatcatgaataatataatatcttgg 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccggtacccagtttaccgagaattcagtaaagtgcaatcatgaataatataatatcttgg 180
Query: 522 agtgccgaagacgaggctatcattgctacaaacacggatgctactgaatgcaagcggtgt 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtgccgaagacgaggctatcattgctacaaacacggatgctactgaatgcaagcggtgt 240
Query: 582 gcagttgaattgggttattggaaagatgaatacatttcatattttgctaaacatgtcgat 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcagttgaattgggttattggaaagatgaatacatttcatattttgctaaacatgtcgat 300
Query: 642 cgaaaagctccagaaataaatcgtggatattatgcgagagttaaagcaatggaaatgttt 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgaaaagctccagaaataaatcgtggatattatgcgagagttaaagcaatggaaatgttt 360
Query: 702 attcatcaatttttagagagatgtggtaccaagtgtcagatcatcaacctgggatgtggt 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attcatcaatttttagagagatgtggtaccaagtgtcagatcatcaacctgggatgtggt 420
Query: 762 tttgatactctgtattggcgcctcaaggacactacacaagccgtcagcaactttatagag 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttgatactctgtattggcgcctcaaggacactacacaagccgtcagcaactttatagag 480
Query: 822 ttggactttccatcggtaacaagcaagaaatgtcacatcatcaaacgtaacaagcagcta 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttggactttccatcggtaacaagcaagaaatgtcacatcatcaaacgtaacaagcagcta 540
Query: 882 ttggagaagatttgcaaagaagatggggaggtcgtgatccggtctggtgatctccactct 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttggagaagatttgcaaagaagatggggaggtcgtgatccggtctggtgatctccactct 600
Query: 942 gacggttaccatctgctgggctgcgacctgcgttgtttggaggaggtccgtcgcaagttg 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacggttaccatctgctgggctgcgacctgcgttgtttggaggaggtccgtcgcaagttg 660
Query: 1002 caggcggccggcgccactgccgaggcacccgcgctgttgctcgcggaatgcgtgttggtg 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caggcggccggcgccactgccgaggcacccgcgctgttgctcgcggaatgcgtgttggtg 720
Query: 1062 tacctgaggcccgaggcggcgctggcgctgctccgccacctggccgccgccttccctcgc 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tacctgaggcccgaggcggcgctggcgctgctccgccacctggccgccgccttccctcgc 780
Query: 1122 tgcgtgctcctgctttacgagcagtgtaacctgtccgaccgcttcggcgaggtcatgctg 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgcgtgctcctgctttacgagcagtgtaacctgtccgaccgcttcggcgaggtcatgctg 840
Query: 1182 cgcaacctgagcgcgcgcggatgtccgctggctggcgccgagcactgccgcgagccggcg 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cgcaacctgagcgcgcgcggatgtccgctggctggcgccgagcactgccgcgagccggcg 900
Query: 1242 gctcaagccgaacgcctcgtgtcactaggcttcgacgcggcgcgctcctgggacatggag 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gctcaagccgaacgcctcgtgtcactaggcttcgacgcggcgcgctcctgggacatggag 960
Query: 1302 accgtgtggcgctccttccccgaggacgagcgctcgcgagtggacgcgctggagatgctg 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 accgtgtggcgctccttccccgaggacgagcgctcgcgagtggacgcgctggagatgctg 1020
Query: 1362 gacgagcgcgagctgctcctgcagctgaacacgcattacgcgctgacggtggccactcgc 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gacgagcgcgagctgctcctgcagctgaacacgcattacgcgctgacggtggccactcgc 1080
Query: 1422 ggggaactgttcgccgacctcgacctcgccgggtagatcggcgcggagtatttatcgtag 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ggggaactgttcgccgacctcgacctcgccgggtagatcggcgcggagtatttatcgtag 1140
Query: 1482 aagttttaaagatatcgctcggtgttatgatagaatgttattatcctcgtgagcttcgga 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aagttttaaagatatcgctcggtgttatgatagaatgttattatcctcgtgagcttcgga 1200
Query: 1542 agtcgactcgttcgagatgaccgttcgtccttttaaaagaagagtattttacttagtcag 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 agtcgactcgttcgagatgaccgttcgtccttttaaaagaagagtattttacttagtcag 1260
Query: 1602 tatcgtgccgttttcttgtgcttactaaactttcccatttcgatgtatcgatgaatgttt 1661
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1261 tatcgtgccgttttcttgtgcttactaaactttcccatttnnatgtatcgatgaatgttt 1320
Query: 1662 atc 1664
|||
Sbjct: 1321 atc 1323
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,390
Number of extensions: 4603
Number of successful extensions: 4603
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4603
Number of HSP's successfully gapped: 1
Length of query: 1957
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1940
Effective length of database: 8,119,229
Effective search space: 15751304260
Effective search space used: 15751304260
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)