BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11591 (UTR included)
(1648 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_736_C1 100 1e-20
BF01059A2H01 98 5e-20
BF01054B2B08 92 3e-18
BF01031B1D09 70 1e-11
BF14_2467_C1 70 1e-11
BF01011A1B08 68 5e-11
>BF14_736_C1
Length = 796
Score = 99.6 bits (50), Expect = 1e-20
Identities = 80/90 (88%)
Strand = Plus / Minus
Query: 580 aggaaagagtgagaaaagggaaagggcaaccagctctctcactgatgggacgaaacgcag 639
||||||| ||||||| ||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 751 aggaaagggtgagaacgcggaaagggcaaccggctctctcactcattggacgaaacgcag 692
Query: 640 ccattaaagactacttcatgccgttcttct 669
||| |||||||||||||| |||| ||||||
Sbjct: 691 ccactaaagactacttcacgccgatcttct 662
>BF01059A2H01
Length = 865
Score = 97.6 bits (49), Expect = 5e-20
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 589 tgagaaaagggaaagggcaaccagctctctcactgatgggacgaaacgcagccattaaag 648
||||||||||||||||||||| ||||||||||| || ||| ||| ||||||||||||||
Sbjct: 192 tgagaaaagggaaagggcaactggctctctcactcatcggaagaatcgcagccattaaag 251
Query: 649 actacttcatgccgttcttct 669
|||||| ||||||| ||||||
Sbjct: 252 actactccatgccgatcttct 272
>BF01054B2B08
Length = 807
Score = 91.7 bits (46), Expect = 3e-18
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 580 aggaaagagtgagaaaagggaaagggcaaccagctctctcactgatgggacgaaacgcag 639
||||||| ||| ||| ||||||||||||||| ||||||||||| || | |||||||||||
Sbjct: 745 aggaaagggtgggaacagggaaagggcaaccggctctctcactcatcgaacgaaacgcag 686
Query: 640 ccattaaagactacttcatgccgttcttct 669
|||||||||||| ||| | |||| ||||||
Sbjct: 685 ccattaaagactgctttacgccgatcttct 656
>BF01031B1D09
Length = 754
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 592 gaaaagggaaagggcaaccagctctctcactgatgggacgaaacgcagccattaaagact 651
||||||||||||||| || ||||||||||| | ||||||||||||||||| |||| ||
Sbjct: 625 gaaaagggaaagggccgccggctctctcactcgtcggacgaaacgcagccataaaaggct 566
Query: 652 acttcatgccg 662
|||||| ||||
Sbjct: 565 acttcacgccg 555
>BF14_2467_C1
Length = 1121
Score = 69.9 bits (35), Expect = 1e-11
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 592 gaaaagggaaagggcaacc-agctctctcactgatgggacgaaacgcagccattaaagac 650
|||||||| |||||||||| ||| |||||||| || |||||||| ||||||||||||||
Sbjct: 353 gaaaagggtaagggcaaccgagc-ctctcactcatcggacgaaaaacagccattaaagac 295
Query: 651 tacttcatgccgttcttct 669
||||||| |||| ||||||
Sbjct: 294 tacttcacgccgatcttct 276
>BF01011A1B08
Length = 853
Score = 67.9 bits (34), Expect = 5e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 592 gaaaagggaaagggcaaccagctctctcactgatgggacgaaacgcagccattaaagact 651
||||||||||||||||| | ||| ||||| | || |||||||||||| |||||| ||||
Sbjct: 23 gaaaagggaaagggcaaacggctttctcattcatcagacgaaacgcagtcattaatgact 82
Query: 652 acttcatgccgttcttct 669
|||||| |||| ||||||
Sbjct: 83 acttcacgccgatcttct 100
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 181,124
Number of extensions: 4127
Number of successful extensions: 4127
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 4127
Number of HSP's successfully gapped: 6
Length of query: 1648
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1631
Effective length of database: 8,119,229
Effective search space: 13242462499
Effective search space used: 13242462499
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)