BLASTN 2.2.24 [Aug-08-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DPGLEAN11603 (UTR included) (1429 letters) Database: est 9484 sequences; 8,280,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BF01056A2A06 555 e-158 BF14_2249_C1 129 1e-29 BF01062A1H02 98 5e-20
>BF01056A2A06 Length = 609 Score = 555 bits (280), Expect = e-158 Identities = 378/413 (91%), Gaps = 1/413 (0%) Strand = Plus / Plus Query: 1017 aacgtgactgtttaatgtccttgattaaattccattacataaaatttgtatatcgatcat 1076 |||||||||||||| ||||||| | ||| |||||||||| || |||||||| ||||| Sbjct: 1 aacgtgactgttta-tgtccttaactaanatccattacatgaannntgtatatccatcat 59 Query: 1077 attattcggcatatatcaacacaatgaaattgtgttataaaagtatacttataaaaaaaa 1136 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 attatttggcatatatcaacacaatgaaattgtgttataaaagtatacttataaaaaaaa 119 Query: 1137 atatcatggcaactagacattgttgtcgacatctaaaatattaaacaataatttgttatt 1196 | ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 aacatatggcaactttacattgttgtcgacatctaaaatattaaacaataatttgttatt 179 Query: 1197 acattataatgaataacctctattaatattaatttataacctgtattgatgtccggttgt 1256 ||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| Sbjct: 180 acattataatgaataacctttattaatattaatttataacctgaatagatgtccggttgt 239 Query: 1257 aattaatacagtatgacggttcagtgatagaatatcaccccagcactatattaagcaagt 1316 |||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 240 aattaatacactatgacggttcaatgatnnnatatcaccccagcactatatcaagcaagt 299 Query: 1317 gtcaaaaaatagtgttaccgattgacagttatagaaattgtttacaataaagtgacataa 1376 ||||||||||||||||||||||||||||||||| |||||||||| |||| | |||| ||| Sbjct: 300 gtcaaaaaatagtgttaccgattgacagttatataaattgtttataatagaatgacttaa 359 Query: 1377 gtttagggttgccctataataaaatatatttaataatttcatgttaaagtctg 1429 ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gttnnnngttgccctataataaaatatatttaataatttcatgttaaagtctg 412 >BF14_2249_C1 Length = 1315 Score = 129 bits (65), Expect = 1e-29 Identities = 107/120 (89%), Gaps = 2/120 (1%) Strand = Plus / Minus Query: 1 tgaatacttgcgaaagacctcattattatcaaggttttagaagaggaaatgatgaaattt 60 |||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||| || Sbjct: 346 tgaatacttgtgaaagaccttattattatcaatgttttagaagaggaaatgataaaaatt 287 Query: 61 tgtattattttttttcaaacataatctgcttaccctaccccaaatctctgtgcacgccac 120 |||| |||||| |||||||| | |||| ||||||||||||||||||||||||||||| Sbjct: 286 agtat--attttttccaaacatattttgctcaccctaccccaaatctctgtgcacgccac 229 >BF01062A1H02 Length = 876 Score = 97.6 bits (49), Expect = 5e-20 Identities = 104/121 (85%), Gaps = 6/121 (4%) Strand = Plus / Minus Query: 1 tgaatacttgcgaaagacctcattattatcaaggttttagaagaggaaatgat---gaaa 57 ||||||||||||||||| ||||||||||||| | |||||| |||||||| || |||| Sbjct: 210 tgaatacttgcgaaagatttcattattatcaatggtttagaggaggaaattattatgaaa 151 Query: 58 ttttgtattattttttttcaaacataatctgcttaccctaccccaaatctctgtgcacgc 117 || ||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||| Sbjct: 150 attggtatt---ttttttcaaacatattctgcttaccctaacccgaatctctgtgcacgc 94 Query: 118 c 118 | Sbjct: 93 c 93 Database: est Posted date: Jul 14, 2011 2:25 PM Number of letters in database: 8,280,457 Number of sequences in database: 9484 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 9484 Number of Hits to DB: 229,994 Number of extensions: 5528 Number of successful extensions: 5528 Number of sequences better than 1.0e-10: 3 Number of HSP's gapped: 5524 Number of HSP's successfully gapped: 3 Length of query: 1429 Length of database: 8,280,457 Length adjustment: 17 Effective length of query: 1412 Effective length of database: 8,119,229 Effective search space: 11464351348 Effective search space used: 11464351348 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 50 (99.1 bits) S1: 12 (24.3 bits) S2: 34 (67.9 bits)