BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11615 (UTR included)
(3643 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011A1H07 1398 0.0
BF14_522_C1 1154 0.0
>BF01011A1H07
Length = 743
Score = 1398 bits (705), Expect = 0.0
Identities = 734/743 (98%), Gaps = 1/743 (0%)
Strand = Plus / Plus
Query: 1231 gtttcatccgcacggtgtacgggctactgaacgc-gccgagcgccgctgtgcgctacgag 1289
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gtttcatccgcacggtgtacgggctactgaacnnngccgagcgccgctgtgcgctacgag 60
Query: 1290 gcggccggcacgctggtcacgctgtccacggcacccgccgccatcaaggcggcggcggcg 1349
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 gcggccggcacgctggtcacgctgtccacggcacccgccgcaatcaaggcggcggcggcg 120
Query: 1350 tgctacatagacctgatagtgaaggagagcgacaacaacgtcaagctgatagtggtggag 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctacatagacctgatagtgaaggagagcgacaacaacgtcaagctgatagtggtggag 180
Query: 1410 aagctgtccgcgctcagggacgtgagctgcgacgccacctcgcgcgccctgcccgagctg 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagctgtccgcgctcagggacgtgagctgcgacgccacctcgcgcgccctgcccgagctg 240
Query: 1470 gccatggacgtgctcagggtgctggcctcctccgacctggacgtccgcaggcacacgctg 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccatggacgtgctcagggtgctggcctcctccgacctggacgtccgcaggcacacgctg 300
Query: 1530 catctcgctctggagctggccactcctcgccacgcggacgagctggtgggcgctctgagg 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catctcgctctggagctggccactcctcgccacgcggacgagctggtgggcgctctgagg 360
Query: 1590 aaggaggcgtcgcgggctcagctcgcggatcacgacgacgcggccaagtaccggcagctg 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaggaggcgtcgcgggctcagctcgcggatcacgacgacgcggccaagtaccggcagctg 420
Query: 1650 ctggtgagggcgatgcatcgagcggccatcaagttcccggaggtggcgtgctcggtggcg 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctggtgagggcgatgcatcgagcggccatcaagttcccggaggtggcgtgctcggtggcg 480
Query: 1710 cccggattgttggagctactaggggacggcggggaggtggcggcgcaggatgtgctcatg 1769
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 cccggattgttggagctgctaggggacggcggggaggtggcggcgcaggacgtgctcatg 540
Query: 1770 ttcaccaggcacgcgctgcacgccttccatgacctgaaacctggcatatacgcgaaacta 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcaccaggcacgcgctgcacgccttccatgacctgaaacctggcatatacgcgaaacta 600
Query: 1830 ctggagagtctgggcagcatccgggtggggaagatcgcgagggccgccctgtggctggtg 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctggagagtctgggcagcatccgggtggggaagatcgcgagggccgccctgtggctggtg 660
Query: 1890 gccgagttcgccgacaacgaggacaacgtgaaggcggccatcgacgtcatcgcggctgcc 1949
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccgagttcgccgacaacgatgacaacgtgaaggcggccatcgacgtcatcgcggctgcc 720
Query: 1950 atgccgacacacaaagacaatga 1972
||||| ||||||||||| |||||
Sbjct: 721 atgcccacacacaaagataatga 743
>BF14_522_C1
Length = 842
Score = 1154 bits (582), Expect = 0.0
Identities = 591/594 (99%)
Strand = Plus / Plus
Query: 2521 agtacgacatagtgctggacgtgttcgtcgtcaaccagacagacgataccctccagaact 2580
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 agtacgacatagtgctggacgtgttcgtcgtcaaccagacagacgatacgctccagaact 60
Query: 2581 gtacggtggagttggcgacgctgggcgagctgcggctggtggagcggccggcgggcatcg 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtacggtggagttggcgacgctgggcgagctgcggctggtggagcggccggcgggcatcg 120
Query: 2641 tactggggccgcgggattacgcctccatcagggcgcacgtcaaggtcgcctccacagaga 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactggggccgcgggattacgcctccatcagggcgcacgtcaaggtcgcctccacagaga 180
Query: 2701 acggcatcatcttcggaaacatcgtgtacgaggtgtccggcgcgtccatggaccgcggcg 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acggcatcatcttcggaaacatcgtgtacgaggtgtccggcgcgtccatggaccgcggcg 240
Query: 2761 tggtcgtgctcaacgacatccacatagacatcgtggactacatacagcccgccgcctgca 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggtcgtgctcaacgacatccacatagacatcgtggactacatacagcccgccgcctgca 300
Query: 2821 gcgacgccgacttccgcaccatgtgggcagagttcgagtgggagaacaaggtgtccgtga 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgacgccgacttccgcaccatgtgggcagagttcgagtgggagaacaaggtgtccgtga 360
Query: 2881 acacgaacatcacggagctgaacgagtacctggagcacctgctggcgtccaccaacatga 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acacgaacatcacggagctgaacgagtacctggagcacctgctggcgtccaccaacatga 420
Query: 2941 agtgcctcactcccgataaggccctgtccggtcagtgcgggttcatggcggccaacctgt 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 agtgcctcactcccgataaggccctgtccggtcagtgcgggttcatggcggccaacccct 480
Query: 3001 acgcgcggtccatattcggcgaggacgcgctcgccaacctcagcatcgagatccccatga 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgcgcggtccatattcggcgaggacgcgctcgccaacctcagcatcgagatccccatga 540
Query: 3061 acaaacagaacgctcccgtcgtgggacacgtgcggatacgggctaagacacagg 3114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaaacagaacgctcccgtcgtgggacacgtgcggatacgggctaagacacagg 594
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,217
Number of extensions: 5577
Number of successful extensions: 5577
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5576
Number of HSP's successfully gapped: 2
Length of query: 3643
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3625
Effective length of database: 8,109,745
Effective search space: 29397825625
Effective search space used: 29397825625
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)