BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11617 (UTR included)
(3646 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1186_C1 993 0.0
BF01038B1D04 428 e-119
BF14_3376_C1 143 2e-33
>BF14_1186_C1
Length = 1103
Score = 993 bits (501), Expect = 0.0
Identities = 510/513 (99%)
Strand = Plus / Plus
Query: 742 gtatattatttgaaactaaggactcatttttactagacataagagaaagtggtatcttag 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gtatattatttgaaactaaggactcatttttactagacataagagaaagtggtatcttag 650
Query: 802 cggccgagacagaagaaaaatccatttttgtaccaaaagcaaatccagttacaaagcatg 861
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 651 cggccgagacagaagaaaaatccatttttgtaccaaaagcaaatccagttacaaagcagg 710
Query: 862 agggtttttatggcttgccaatgattgtcaaaggattgtttaaaacttatagaaatattg 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 agggtttttatggcttgccaatgattgtcaaaggattgtttaaaacttatagaaatattg 770
Query: 922 aacagttgtatgattggcaagaggaatgccttaatctgcaggctatcagagatagactta 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aacagttgtatgattggcaagaggaatgccttaatctgcaggctatcagagatagactta 830
Query: 982 atttgatctatgctctaccgacaagtggcggaaaaactctagttgctgaagtacttatgt 1041
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 831 atttgatctatgctctaccgacaagtggtggaaaaactctagttgctgaagtacttatgt 890
Query: 1042 tgagagaagtgatcaatagaaaacataatgccatatttatactgccctttgttgctatag 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 tgagagaagtgatcaatagaaaacataatgccatatttatactgccctttgttgctatag 950
Query: 1102 tgcaggaaaagatatgggctctggcaccatttgccctgcaactggagttcttagtagaag 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 tgcaggaaaagatatgggctctggcaccatttgccctgcaactggagttcttagtagaag 1010
Query: 1162 aatatgcaggaggaaagggtcacctgccaccaaagaaaagaagaaaaaagaacaccatat 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1011 aatatgcaggaggaaagggtcacctgccaccaaagaaaagaagaaaaaagaacacaatat 1070
Query: 1222 atatagccaccatagaaaaggggttggcgctag 1254
|||||||||||||||||||||||||||||||||
Sbjct: 1071 atatagccaccatagaaaaggggttggcgctag 1103
>BF01038B1D04
Length = 603
Score = 428 bits (216), Expect = e-119
Identities = 228/232 (98%)
Strand = Plus / Minus
Query: 3314 taaattgtatgatttatttatcgtttcttataaacgcatggcttcaaggacatattcggc 3373
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 taaattgtattatttatttatcgtttcttataaacgcatggcttcaaggacatattcggc 511
Query: 3374 aacttgcccttcttagccggagggtcgcgggccttggagaactccatgaacacaaacacc 3433
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agcttgcccttcttagccggagggtcgcgggccttggagaactccatgaacacaaacacc 451
Query: 3434 ttttgggatttatcgatctttttaagactgaagccaagtttctgaacgtcgctcgtgaac 3493
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttctgggatttatcgatctttttaagactgaagccaagtttctgaacgtcgctcgtgaac 391
Query: 3494 gtatcgacgtcgtggaaacggctctcgacttccgctatcagaagatggccgc 3545
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 390 gtatcgacgtcgtggaaacggctctccacttccgctatcagaagatggccgc 339
>BF14_3376_C1
Length = 794
Score = 143 bits (72), Expect = 2e-33
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 575 gtcgcacgggttgaagacggtcactcagtcactcggcacgggtacaggaccggcagcaaa 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gtcgcacgggttgaagacggtcactcagtcactcggcacgggtacaggaccggcagcaaa 13
Query: 635 gcgacgttggaa 646
||||||||||||
Sbjct: 12 gcgacgttggaa 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 332,036
Number of extensions: 6264
Number of successful extensions: 6264
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6264
Number of HSP's successfully gapped: 3
Length of query: 3646
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3628
Effective length of database: 8,109,745
Effective search space: 29422154860
Effective search space used: 29422154860
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)