BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11623 (UTR included)
(2479 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B1D04 1074 0.0
BF01060B1A07 1023 0.0
>BF01038B1D04
Length = 603
Score = 1074 bits (542), Expect = 0.0
Identities = 563/570 (98%)
Strand = Plus / Plus
Query: 1427 ggatcctggcgctttccaagtgtaccatgagggttaccaacaacaggtgaagaggtggcc 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatcctggcgctttccaagtgtaccatgagggttaccaacaacaggtgaagaggtggcc 60
Query: 1487 catcaagccgcttgatgtcattgttaagaggatacagaagatgcccaaaagttatgtcat 1546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 catcaagccgcttgatgtcattgttaagaggatacagaagatgcccaaaagttatgccat 120
Query: 1547 agctgacctgggttgcggggaagcagagctgtcgacccgtgttgtgcaaaaggtgagatc 1606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctgacctgggttgcggggaagcagagctgtcgacccgtgttgtgcaaaaggtgagatc 180
Query: 1607 gtttgatctcgtgtcaactaagccctgtgtggagacatgtgacatggcacacactccctt 1666
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtttgatctcgtgtcaaccaagccctgtgtggagacatgtgacatggcacacactccctt 240
Query: 1667 actgagcgcctccatggatgtagctgtgtattgtctagcattgatgggaactgacctcac 1726
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 241 actgagcgcctccatggatgtagctgtgtattgtctagcgttgatgggaactgacctcac 300
Query: 1727 acaatatctcatcgaagctaacagaatactcaaagttggcggccatcttctgatagcgga 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaatatctcatcgaagctaacagaatactcaaagttggcggccatcttctgatagcgga 360
Query: 1787 agtcgagagccgtttccacgacgtcgatacgttcacgagcgacgttcagaaacttggctt 1846
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtggagagccgtttccacgacgtcgatacgttcacgagcgacgttcagaaacttggctt 420
Query: 1847 cagtcttaaaaagatcgataaatcccaaaaggtgtttgtgttcatggagttctccaaggc 1906
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 cagtcttaaaaagatcgataaatcccagaaggtgtttgtgttcatggagttctccaaggc 480
Query: 1907 ccgcgaccctccggctaagaagggcaagttgccgaatatgtccttgaagccatgcgttta 1966
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 ccgcgaccctccggctaagaagggcaagctgccgaatatgtccttgaagccatgcgttta 540
Query: 1967 taagaaacgataaataaatcatacaattta 1996
||||||||||||||||||| ||||||||||
Sbjct: 541 taagaaacgataaataaataatacaattta 570
>BF01060B1A07
Length = 789
Score = 1023 bits (516), Expect = 0.0
Identities = 568/584 (97%), Gaps = 1/584 (0%)
Strand = Plus / Plus
Query: 1 ttaaataacgcgtttctgattttaatttttttatatagttttactaagttcttgtagttc 60
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttaaataacgcgtttataattttaatttttttatatagttttactaagttcttgtagttt 265
Query: 61 taacctctggctgggcgtggctcgggctaaacattacacaaaagaatcgtgtttgtttcc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgacctctggctgggcgtggctcgggctaaacattacacaaaagaatcgtgtttgtttcc 325
Query: 121 atgaaattaaaaacaaatataatttcggaagctttgttagttactgttactacctcgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 326 atgaaattaaaaacaaatataatttcggaagctttgttagttactgttactacgtcgttt 385
Query: 181 ttccttttaaatacgtaaaatatatttaattaattaaaacctaataaaataatataattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttccttttaaatacgtaaaatatatttaattaattaaaacctaataaaataatataattt 445
Query: 241 attataatataatgttatataactcaatatcattcaaacaaatggcgatttatttgaaaa 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 446 attataatataatgttacataactcaatatcattcaaacaaatggcgatttatttaaaaa 505
Query: 301 gttaatttaaaaatagtaatatttaaaaatatatactttcttagactattgtaacattaa 360
||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 506 gttaatttaaaaatagtcatatttaaaaatatatactttcttcgactgttgtaacattaa 565
Query: 361 acgtcaaaattacaacgacactgacattaaattccatcagattttgaatgtcaaaaccgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 acgtcaaaattacaacgacactgacattaaattccatcagattttgaatgtcaaaaccgc 625
Query: 421 acttgtttattgtaaatttatgtgttatagcacatatttagagaatcgtttaaagtttg- 479
| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 626 atttgtatattgtaaatttatatgttatagtacatatttagagaatcgtttaaagtttga 685
Query: 480 attaactatttcttttaagttatgggtaaaatgtttaatataccagaatgggaggacact 539
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ataaactatttcttttaagttatgggtaaaatgtttaatataccagaatgggaggacact 745
Query: 540 cccgacaatatcgtcagttttccgatgaagtttgaaaaagaaga 583
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cccgacaatatcgtcagttttccgatgaagtttgaaaaagaaga 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 391,531
Number of extensions: 21119
Number of successful extensions: 21119
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 21118
Number of HSP's successfully gapped: 2
Length of query: 2479
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2462
Effective length of database: 8,119,229
Effective search space: 19989541798
Effective search space used: 19989541798
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)